Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03948 and SMc03898 overlap by 4 nucleotides SMc03898 and SMc03899 are separated by 24 nucleotides SMc03899 and SMc03900 are separated by 286 nucleotides
SMc03948: SMc03948 - transposase ISRM1, at 3,566,939 to 3,567,769
SMc03948
SMc03898: SMc03898 - transposase ISRM1, at 3,567,766 to 3,568,158
SMc03898
SMc03899: SMc03899 - hypothetical protein, at 3,568,183 to 3,568,434
SMc03899
SMc03900: SMc03900 - cyclic beta-1,2-glucan ABc transporter, at 3,568,721 to 3,570,571
SMc03900
Position (kb)
3568
3569 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3568.323 kb on - strand, within SMc03899 at 3568.426 kb on - strand at 3568.587 kb on - strand at 3568.592 kb on - strand at 3568.592 kb on - strand at 3568.625 kb on - strand at 3568.832 kb on + strand at 3568.832 kb on + strand at 3568.832 kb on + strand at 3568.832 kb on + strand at 3568.832 kb on + strand at 3568.832 kb on + strand at 3568.833 kb on - strand at 3568.833 kb on - strand at 3568.833 kb on - strand at 3568.833 kb on - strand at 3568.833 kb on - strand at 3568.833 kb on - strand at 3568.833 kb on - strand at 3568.850 kb on + strand at 3568.851 kb on - strand at 3568.891 kb on - strand at 3569.020 kb on + strand, within SMc03900 at 3569.020 kb on + strand, within SMc03900 at 3569.021 kb on - strand, within SMc03900 at 3569.021 kb on - strand, within SMc03900 at 3569.021 kb on - strand, within SMc03900 at 3569.164 kb on + strand, within SMc03900 at 3569.164 kb on + strand, within SMc03900 at 3569.164 kb on + strand, within SMc03900 at 3569.165 kb on - strand, within SMc03900 at 3569.165 kb on - strand, within SMc03900 at 3569.318 kb on + strand, within SMc03900 at 3569.318 kb on + strand, within SMc03900 at 3569.318 kb on + strand, within SMc03900 at 3569.318 kb on + strand, within SMc03900 at 3569.318 kb on + strand, within SMc03900 at 3569.318 kb on + strand, within SMc03900 at 3569.318 kb on + strand at 3569.318 kb on + strand, within SMc03900 at 3569.319 kb on - strand, within SMc03900 at 3569.319 kb on - strand, within SMc03900 at 3569.319 kb on - strand, within SMc03900 at 3569.319 kb on - strand, within SMc03900 at 3569.384 kb on + strand, within SMc03900 at 3569.384 kb on + strand, within SMc03900 at 3569.384 kb on + strand, within SMc03900 at 3569.384 kb on + strand, within SMc03900 at 3569.384 kb on + strand, within SMc03900 at 3569.430 kb on - strand, within SMc03900
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 3,568,323 - SMc03899 0.56 -1.0 3,568,426 - -1.6 3,568,587 - +2.5 3,568,592 - +2.5 3,568,592 - +2.2 3,568,625 - +2.6 3,568,832 + +3.4 3,568,832 + +2.4 3,568,832 + +2.8 3,568,832 + +2.4 3,568,832 + +2.4 3,568,832 + +2.5 3,568,833 - +2.9 3,568,833 - +2.4 3,568,833 - +2.7 3,568,833 - +2.8 3,568,833 - +3.1 3,568,833 - +2.7 3,568,833 - +2.7 3,568,850 + +2.8 3,568,851 - +1.8 3,568,891 - +2.0 3,569,020 + SMc03900 0.16 +2.6 3,569,020 + SMc03900 0.16 +2.2 3,569,021 - SMc03900 0.16 +2.9 3,569,021 - SMc03900 0.16 +2.7 3,569,021 - SMc03900 0.16 +2.5 3,569,164 + SMc03900 0.24 +3.0 3,569,164 + SMc03900 0.24 +2.8 3,569,164 + SMc03900 0.24 +4.3 3,569,165 - SMc03900 0.24 +2.9 3,569,165 - SMc03900 0.24 +2.9 3,569,318 + SMc03900 0.32 +2.5 3,569,318 + SMc03900 0.32 +2.7 3,569,318 + SMc03900 0.32 +2.9 3,569,318 + SMc03900 0.32 +3.5 3,569,318 + SMc03900 0.32 +2.8 3,569,318 + SMc03900 0.32 +2.2 3,569,318 + +3.8 3,569,318 + SMc03900 0.32 +2.4 3,569,319 - SMc03900 0.32 +2.7 3,569,319 - SMc03900 0.32 +3.2 3,569,319 - SMc03900 0.32 +2.7 3,569,319 - SMc03900 0.32 +2.3 3,569,384 + SMc03900 0.36 +2.7 3,569,384 + SMc03900 0.36 +2.8 3,569,384 + SMc03900 0.36 +3.3 3,569,384 + SMc03900 0.36 +2.8 3,569,384 + SMc03900 0.36 +1.6 3,569,430 - SMc03900 0.38 +3.3
Or see this region's nucleotide sequence