Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03181 and SMc03182 are separated by 2 nucleotides SMc03182 and SMc03183 overlap by 4 nucleotides SMc03183 and SMc03184 overlap by 4 nucleotides SMc03184 and SMc03185 are separated by 0 nucleotides
SMc03181: SMc03181 - monovalent cation/H+ antiporter subunit D, at 3,147,068 to 3,148,687
SMc03181
SMc03182: SMc03182 - pH adaptation potassium efflux system E transmembrane protein, at 3,148,690 to 3,149,175
SMc03182
SMc03183: SMc03183 - monovalent cation/H+ antiporter subunit F, at 3,149,172 to 3,149,453
SMc03183
SMc03184: SMc03184 - PH adaptation potassium efflux system G transmembrane protein, at 3,149,450 to 3,149,815
SMc03184
SMc03185: SMc03185 - NADPH dehydrogenase quinone reductase transmembrane protein, at 3,149,816 to 3,150,628
SMc03185
Position (kb)
3148
3149
3150 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3147.794 kb on + strand, within SMc03181 at 3147.854 kb on + strand, within SMc03181 at 3147.854 kb on + strand, within SMc03181 at 3147.854 kb on + strand, within SMc03181 at 3147.855 kb on - strand, within SMc03181 at 3147.975 kb on + strand, within SMc03181 at 3148.023 kb on + strand, within SMc03181 at 3148.091 kb on + strand, within SMc03181 at 3148.199 kb on + strand, within SMc03181 at 3148.415 kb on + strand, within SMc03181 at 3148.415 kb on + strand, within SMc03181 at 3148.415 kb on + strand, within SMc03181 at 3148.416 kb on - strand, within SMc03181 at 3148.686 kb on - strand at 3148.776 kb on + strand, within SMc03182 at 3148.777 kb on - strand, within SMc03182 at 3148.777 kb on - strand, within SMc03182 at 3149.062 kb on + strand, within SMc03182 at 3149.062 kb on + strand, within SMc03182 at 3149.063 kb on - strand, within SMc03182 at 3149.165 kb on + strand at 3149.166 kb on - strand at 3149.248 kb on - strand, within SMc03183 at 3149.304 kb on + strand, within SMc03183 at 3149.304 kb on + strand, within SMc03183 at 3149.305 kb on - strand, within SMc03183 at 3149.361 kb on + strand, within SMc03183 at 3149.361 kb on + strand, within SMc03183 at 3149.667 kb on + strand, within SMc03184 at 3149.748 kb on - strand, within SMc03184 at 3149.813 kb on + strand at 3149.813 kb on + strand at 3149.813 kb on + strand at 3149.814 kb on - strand at 3149.814 kb on - strand at 3149.817 kb on + strand at 3149.818 kb on - strand at 3149.818 kb on - strand at 3149.818 kb on - strand at 3149.925 kb on + strand, within SMc03185 at 3149.926 kb on - strand, within SMc03185 at 3149.926 kb on - strand, within SMc03185 at 3150.045 kb on + strand, within SMc03185 at 3150.084 kb on + strand, within SMc03185 at 3150.084 kb on + strand, within SMc03185 at 3150.151 kb on - strand, within SMc03185 at 3150.151 kb on - strand, within SMc03185
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 3,147,794 + SMc03181 0.45 -1.4 3,147,854 + SMc03181 0.49 -2.3 3,147,854 + SMc03181 0.49 -0.7 3,147,854 + SMc03181 0.49 -3.1 3,147,855 - SMc03181 0.49 -1.4 3,147,975 + SMc03181 0.56 -0.9 3,148,023 + SMc03181 0.59 -0.3 3,148,091 + SMc03181 0.63 +2.1 3,148,199 + SMc03181 0.70 +3.2 3,148,415 + SMc03181 0.83 -1.1 3,148,415 + SMc03181 0.83 -1.2 3,148,415 + SMc03181 0.83 -1.9 3,148,416 - SMc03181 0.83 -0.3 3,148,686 - -2.7 3,148,776 + SMc03182 0.18 -2.3 3,148,777 - SMc03182 0.18 -1.6 3,148,777 - SMc03182 0.18 -0.4 3,149,062 + SMc03182 0.77 -1.1 3,149,062 + SMc03182 0.77 -1.0 3,149,063 - SMc03182 0.77 -2.3 3,149,165 + +0.1 3,149,166 - -2.5 3,149,248 - SMc03183 0.27 -3.4 3,149,304 + SMc03183 0.47 +0.1 3,149,304 + SMc03183 0.47 +1.1 3,149,305 - SMc03183 0.47 -1.1 3,149,361 + SMc03183 0.67 -0.5 3,149,361 + SMc03183 0.67 -1.0 3,149,667 + SMc03184 0.59 -1.6 3,149,748 - SMc03184 0.81 +1.8 3,149,813 + +0.2 3,149,813 + +1.1 3,149,813 + +0.9 3,149,814 - +0.5 3,149,814 - -0.3 3,149,817 + +2.5 3,149,818 - -0.4 3,149,818 - +0.3 3,149,818 - -0.6 3,149,925 + SMc03185 0.13 +0.6 3,149,926 - SMc03185 0.14 +0.7 3,149,926 - SMc03185 0.14 -1.8 3,150,045 + SMc03185 0.28 -0.5 3,150,084 + SMc03185 0.33 -1.1 3,150,084 + SMc03185 0.33 -0.5 3,150,151 - SMc03185 0.41 -1.3 3,150,151 - SMc03185 0.41 -0.8
Or see this region's nucleotide sequence