Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02774 and SMc02773 are separated by 111 nucleotides SMc02773 and SMc02772 are separated by 33 nucleotides
SMc02774: SMc02774 - ABC transporter substrate-binding protein, at 19,442 to 20,431
SMc02774
SMc02773: SMc02773 - ABC transporter ATP-binding protein, at 20,543 to 22,096
SMc02773
SMc02772: SMc02772 - sugar ABC transporter permease, at 22,130 to 23,104
SMc02772
Position (kb)
20
21
22
23 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 19.876 kb on - strand, within SMc02774 at 19.945 kb on + strand, within SMc02774 at 20.016 kb on - strand, within SMc02774 at 20.045 kb on + strand, within SMc02774 at 20.045 kb on + strand, within SMc02774 at 20.045 kb on + strand, within SMc02774 at 20.046 kb on - strand, within SMc02774 at 20.292 kb on - strand, within SMc02774 at 20.292 kb on - strand, within SMc02774 at 20.292 kb on - strand, within SMc02774 at 20.292 kb on - strand, within SMc02774 at 20.354 kb on - strand at 20.383 kb on + strand at 20.384 kb on - strand at 20.384 kb on - strand at 20.547 kb on + strand at 21.200 kb on + strand, within SMc02773 at 21.201 kb on - strand, within SMc02773 at 21.201 kb on - strand, within SMc02773 at 21.351 kb on - strand, within SMc02773 at 21.426 kb on + strand, within SMc02773 at 21.426 kb on + strand, within SMc02773 at 21.427 kb on - strand, within SMc02773 at 21.427 kb on - strand, within SMc02773 at 21.427 kb on - strand, within SMc02773 at 21.427 kb on - strand, within SMc02773 at 21.427 kb on - strand, within SMc02773 at 21.465 kb on - strand, within SMc02773 at 21.568 kb on - strand, within SMc02773 at 21.664 kb on + strand, within SMc02773 at 21.665 kb on - strand, within SMc02773 at 21.971 kb on + strand at 21.986 kb on + strand at 21.986 kb on + strand at 21.987 kb on - strand at 22.685 kb on + strand, within SMc02772 at 22.686 kb on - strand, within SMc02772 at 22.686 kb on - strand, within SMc02772 at 22.702 kb on + strand, within SMc02772 at 22.719 kb on - strand, within SMc02772 at 22.787 kb on + strand, within SMc02772 at 22.788 kb on - strand, within SMc02772 at 22.788 kb on - strand, within SMc02772 at 22.796 kb on + strand, within SMc02772 at 22.797 kb on - strand, within SMc02772 at 22.797 kb on - strand, within SMc02772 at 22.797 kb on - strand, within SMc02772 at 22.798 kb on + strand, within SMc02772 at 23.016 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 19,876 - SMc02774 0.44 +0.0 19,945 + SMc02774 0.51 +1.0 20,016 - SMc02774 0.58 -1.1 20,045 + SMc02774 0.61 +1.3 20,045 + SMc02774 0.61 -0.5 20,045 + SMc02774 0.61 +0.3 20,046 - SMc02774 0.61 +0.5 20,292 - SMc02774 0.86 +0.5 20,292 - SMc02774 0.86 +0.0 20,292 - SMc02774 0.86 -0.5 20,292 - SMc02774 0.86 -3.0 20,354 - +0.3 20,383 + -2.2 20,384 - -0.3 20,384 - +0.5 20,547 + -0.2 21,200 + SMc02773 0.42 -0.3 21,201 - SMc02773 0.42 +1.7 21,201 - SMc02773 0.42 -3.2 21,351 - SMc02773 0.52 -0.5 21,426 + SMc02773 0.57 -0.5 21,426 + SMc02773 0.57 -0.1 21,427 - SMc02773 0.57 -2.7 21,427 - SMc02773 0.57 +0.0 21,427 - SMc02773 0.57 +0.2 21,427 - SMc02773 0.57 -0.1 21,427 - SMc02773 0.57 +0.0 21,465 - SMc02773 0.59 -0.7 21,568 - SMc02773 0.66 -2.1 21,664 + SMc02773 0.72 -0.5 21,665 - SMc02773 0.72 -0.2 21,971 + +1.0 21,986 + -0.7 21,986 + -2.7 21,987 - +0.1 22,685 + SMc02772 0.57 -0.0 22,686 - SMc02772 0.57 +0.6 22,686 - SMc02772 0.57 +0.7 22,702 + SMc02772 0.59 -2.8 22,719 - SMc02772 0.60 -0.2 22,787 + SMc02772 0.67 -0.1 22,788 - SMc02772 0.67 -0.3 22,788 - SMc02772 0.67 -0.1 22,796 + SMc02772 0.68 +0.2 22,797 - SMc02772 0.68 -0.4 22,797 - SMc02772 0.68 -3.2 22,797 - SMc02772 0.68 -0.1 22,798 + SMc02772 0.69 +0.2 23,016 + -2.4
Or see this region's nucleotide sequence