Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02420 and SMc02421 overlap by 1 nucleotides SMc02421 and SMc02423 overlap by 8 nucleotides SMc02423 and SMc02424 overlap by 4 nucleotides
SMc02420: SMc02420 - cytosine deaminase, at 2,792,811 to 2,794,004
SMc02420
SMc02421: SMc02421 - N-ethylammeline chlorohydrolase, at 2,794,004 to 2,795,497
SMc02421
SMc02423: SMc02423 - oligopeptide transport ATP-binding ABC transporter protein, at 2,795,490 to 2,796,473
SMc02423
SMc02424: SMc02424 - oligopeptide transport ATP-binding ABC transporter protein, at 2,796,470 to 2,797,474
SMc02424
Position (kb)
2794
2795
2796 Strain fitness (log2 ratio)
-2
-1
0
1 at 2793.558 kb on + strand, within SMc02420 at 2793.734 kb on + strand, within SMc02420 at 2794.087 kb on + strand at 2794.087 kb on + strand at 2794.087 kb on + strand at 2794.087 kb on + strand at 2794.087 kb on + strand at 2794.087 kb on + strand at 2794.087 kb on + strand at 2794.088 kb on - strand at 2794.088 kb on - strand at 2794.255 kb on + strand, within SMc02421 at 2794.256 kb on - strand, within SMc02421 at 2794.319 kb on + strand, within SMc02421 at 2794.320 kb on - strand, within SMc02421 at 2794.337 kb on + strand, within SMc02421 at 2794.408 kb on + strand, within SMc02421 at 2794.409 kb on - strand, within SMc02421 at 2794.409 kb on - strand, within SMc02421 at 2794.518 kb on - strand, within SMc02421 at 2794.628 kb on + strand, within SMc02421 at 2795.014 kb on + strand at 2795.015 kb on - strand, within SMc02421 at 2795.015 kb on - strand, within SMc02421 at 2795.032 kb on + strand, within SMc02421 at 2795.033 kb on - strand, within SMc02421 at 2795.075 kb on - strand, within SMc02421 at 2795.075 kb on - strand, within SMc02421 at 2795.414 kb on + strand at 2795.415 kb on - strand at 2795.476 kb on - strand at 2795.801 kb on + strand, within SMc02423 at 2796.186 kb on + strand, within SMc02423 at 2796.186 kb on + strand, within SMc02423 at 2796.186 kb on + strand, within SMc02423 at 2796.186 kb on + strand, within SMc02423 at 2796.186 kb on + strand, within SMc02423 at 2796.187 kb on - strand, within SMc02423 at 2796.187 kb on - strand, within SMc02423 at 2796.187 kb on - strand, within SMc02423 at 2796.251 kb on + strand, within SMc02423 at 2796.251 kb on + strand, within SMc02423 at 2796.252 kb on - strand, within SMc02423 at 2796.252 kb on - strand, within SMc02423 at 2796.252 kb on - strand, within SMc02423 at 2796.344 kb on - strand, within SMc02423 at 2796.418 kb on + strand at 2796.418 kb on + strand at 2796.419 kb on - strand at 2796.419 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 2,793,558 + SMc02420 0.63 -2.0 2,793,734 + SMc02420 0.77 +1.1 2,794,087 + +0.0 2,794,087 + -1.0 2,794,087 + -1.0 2,794,087 + +0.6 2,794,087 + -0.8 2,794,087 + -2.0 2,794,087 + -0.3 2,794,088 - +0.3 2,794,088 - +0.3 2,794,255 + SMc02421 0.17 +1.3 2,794,256 - SMc02421 0.17 -2.0 2,794,319 + SMc02421 0.21 +0.4 2,794,320 - SMc02421 0.21 -0.2 2,794,337 + SMc02421 0.22 -0.2 2,794,408 + SMc02421 0.27 -0.4 2,794,409 - SMc02421 0.27 +0.4 2,794,409 - SMc02421 0.27 -0.1 2,794,518 - SMc02421 0.34 -1.2 2,794,628 + SMc02421 0.42 -0.3 2,795,014 + -1.8 2,795,015 - SMc02421 0.68 -0.8 2,795,015 - SMc02421 0.68 -0.2 2,795,032 + SMc02421 0.69 +0.5 2,795,033 - SMc02421 0.69 -0.3 2,795,075 - SMc02421 0.72 +0.1 2,795,075 - SMc02421 0.72 -1.2 2,795,414 + -0.5 2,795,415 - -0.1 2,795,476 - -0.1 2,795,801 + SMc02423 0.32 +0.3 2,796,186 + SMc02423 0.71 +0.5 2,796,186 + SMc02423 0.71 +0.6 2,796,186 + SMc02423 0.71 -1.7 2,796,186 + SMc02423 0.71 +1.6 2,796,186 + SMc02423 0.71 +1.6 2,796,187 - SMc02423 0.71 -1.2 2,796,187 - SMc02423 0.71 -0.4 2,796,187 - SMc02423 0.71 -0.1 2,796,251 + SMc02423 0.77 +1.0 2,796,251 + SMc02423 0.77 +0.7 2,796,252 - SMc02423 0.77 +0.4 2,796,252 - SMc02423 0.77 +0.7 2,796,252 - SMc02423 0.77 -0.3 2,796,344 - SMc02423 0.87 -0.5 2,796,418 + -0.5 2,796,418 + -1.1 2,796,419 - -0.3 2,796,419 - +0.4
Or see this region's nucleotide sequence