Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02396 and SMc02397 are separated by 109 nucleotides SMc02397 and SMc02398 are separated by 261 nucleotides SMc02398 and SMc05004 overlap by 73 nucleotides
SMc02396: SMc02396 - outer membrane protein, at 1,148,609 to 1,149,646
SMc02396
SMc02397: SMc02397 - integrase, at 1,149,756 to 1,150,688
SMc02397
SMc02398: SMc02398 - transposase ISRM11/ISRM2011-2, at 1,150,950 to 1,151,357
SMc02398
SMc05004: SMc05004 - hypothetical protein, at 1,151,285 to 1,151,770
SMc05004
SMc02399: SMc02399 - transposase ISRM11/ISRM2011-2, at 1,151,291 to 1,151,896
SMc02399
Position (kb)
1149
1150
1151 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1149.712 kb on + strand at 1149.719 kb on - strand at 1149.719 kb on - strand at 1149.791 kb on + strand at 1149.792 kb on - strand at 1149.911 kb on + strand, within SMc02397 at 1149.934 kb on - strand, within SMc02397 at 1150.070 kb on + strand, within SMc02397 at 1150.071 kb on - strand, within SMc02397 at 1150.133 kb on + strand, within SMc02397 at 1150.179 kb on - strand, within SMc02397 at 1150.192 kb on - strand, within SMc02397 at 1150.201 kb on + strand, within SMc02397 at 1150.207 kb on + strand, within SMc02397 at 1150.207 kb on + strand, within SMc02397 at 1150.208 kb on - strand, within SMc02397 at 1150.336 kb on + strand, within SMc02397 at 1150.336 kb on + strand, within SMc02397 at 1150.337 kb on - strand, within SMc02397 at 1150.337 kb on - strand, within SMc02397 at 1150.419 kb on + strand, within SMc02397 at 1150.419 kb on + strand, within SMc02397 at 1150.510 kb on + strand, within SMc02397 at 1150.511 kb on - strand, within SMc02397 at 1150.511 kb on - strand, within SMc02397 at 1150.511 kb on - strand, within SMc02397 at 1150.511 kb on - strand, within SMc02397 at 1150.613 kb on + strand at 1150.613 kb on + strand at 1150.614 kb on - strand at 1150.614 kb on - strand at 1150.615 kb on + strand at 1150.615 kb on + strand at 1150.616 kb on - strand at 1150.754 kb on + strand at 1150.754 kb on + strand at 1150.756 kb on + strand at 1150.847 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,149,712 + +2.4 1,149,719 - +0.3 1,149,719 - +0.2 1,149,791 + +0.5 1,149,792 - +0.1 1,149,911 + SMc02397 0.17 +1.2 1,149,934 - SMc02397 0.19 +0.1 1,150,070 + SMc02397 0.34 +1.8 1,150,071 - SMc02397 0.34 +0.1 1,150,133 + SMc02397 0.40 +1.3 1,150,179 - SMc02397 0.45 -0.0 1,150,192 - SMc02397 0.47 -0.9 1,150,201 + SMc02397 0.48 -0.1 1,150,207 + SMc02397 0.48 -3.2 1,150,207 + SMc02397 0.48 -0.9 1,150,208 - SMc02397 0.48 +0.6 1,150,336 + SMc02397 0.62 -0.7 1,150,336 + SMc02397 0.62 +0.7 1,150,337 - SMc02397 0.62 -0.9 1,150,337 - SMc02397 0.62 +0.8 1,150,419 + SMc02397 0.71 +1.8 1,150,419 + SMc02397 0.71 +1.6 1,150,510 + SMc02397 0.81 +1.0 1,150,511 - SMc02397 0.81 -0.7 1,150,511 - SMc02397 0.81 -0.6 1,150,511 - SMc02397 0.81 +0.0 1,150,511 - SMc02397 0.81 +0.8 1,150,613 + -0.4 1,150,613 + +0.7 1,150,614 - +0.5 1,150,614 - -3.0 1,150,615 + -1.9 1,150,615 + -0.8 1,150,616 - -0.8 1,150,754 + -2.2 1,150,754 + +0.9 1,150,756 + -0.3 1,150,847 + -0.1
Or see this region's nucleotide sequence