Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02030 and SMc02031 are separated by 258 nucleotides SMc02031 and SMc02032 are separated by 122 nucleotides
SMc02030: SMc02030 - transcriptional regulator, at 2,734,709 to 2,735,614
SMc02030
SMc02031: SMc02031 - permease, at 2,735,873 to 2,736,922
SMc02031
SMc02032: SMc02032 - ABC transporter ATP-binding protein, at 2,737,045 to 2,738,529
SMc02032
Position (kb)
2735
2736
2737 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 2734.875 kb on + strand, within SMc02030 at 2734.875 kb on + strand, within SMc02030 at 2734.917 kb on + strand, within SMc02030 at 2734.917 kb on + strand, within SMc02030 at 2734.917 kb on + strand, within SMc02030 at 2734.917 kb on + strand, within SMc02030 at 2734.918 kb on - strand, within SMc02030 at 2734.918 kb on - strand, within SMc02030 at 2734.955 kb on + strand, within SMc02030 at 2734.955 kb on + strand, within SMc02030 at 2734.956 kb on - strand, within SMc02030 at 2734.956 kb on - strand, within SMc02030 at 2734.956 kb on - strand, within SMc02030 at 2734.968 kb on - strand, within SMc02030 at 2734.968 kb on - strand, within SMc02030 at 2735.271 kb on + strand, within SMc02030 at 2735.271 kb on + strand, within SMc02030 at 2735.272 kb on - strand, within SMc02030 at 2735.727 kb on - strand at 2735.764 kb on - strand at 2735.764 kb on - strand at 2735.795 kb on + strand at 2735.795 kb on + strand at 2735.796 kb on - strand at 2735.844 kb on - strand at 2735.867 kb on + strand at 2735.867 kb on + strand at 2735.868 kb on - strand at 2735.868 kb on - strand at 2736.032 kb on + strand, within SMc02031 at 2736.033 kb on - strand, within SMc02031 at 2736.186 kb on + strand, within SMc02031 at 2736.186 kb on + strand, within SMc02031 at 2736.186 kb on + strand, within SMc02031 at 2736.187 kb on - strand, within SMc02031 at 2736.259 kb on - strand, within SMc02031 at 2736.259 kb on - strand, within SMc02031 at 2736.259 kb on - strand, within SMc02031 at 2736.294 kb on + strand, within SMc02031 at 2736.295 kb on - strand, within SMc02031 at 2736.623 kb on + strand, within SMc02031 at 2736.677 kb on + strand, within SMc02031 at 2736.678 kb on - strand, within SMc02031 at 2736.678 kb on - strand, within SMc02031 at 2736.916 kb on + strand at 2737.046 kb on + strand at 2737.078 kb on + strand at 2737.079 kb on - strand at 2737.419 kb on + strand, within SMc02032 at 2737.419 kb on + strand, within SMc02032 at 2737.667 kb on + strand, within SMc02032 at 2737.668 kb on - strand, within SMc02032
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 2,734,875 + SMc02030 0.18 -0.3 2,734,875 + SMc02030 0.18 -0.0 2,734,917 + SMc02030 0.23 -0.3 2,734,917 + SMc02030 0.23 +0.5 2,734,917 + SMc02030 0.23 +0.2 2,734,917 + SMc02030 0.23 +3.1 2,734,918 - SMc02030 0.23 -0.5 2,734,918 - SMc02030 0.23 -0.3 2,734,955 + SMc02030 0.27 -0.2 2,734,955 + SMc02030 0.27 +0.3 2,734,956 - SMc02030 0.27 -0.7 2,734,956 - SMc02030 0.27 -0.8 2,734,956 - SMc02030 0.27 -0.8 2,734,968 - SMc02030 0.29 +0.9 2,734,968 - SMc02030 0.29 -2.2 2,735,271 + SMc02030 0.62 -1.3 2,735,271 + SMc02030 0.62 -0.6 2,735,272 - SMc02030 0.62 +0.9 2,735,727 - -0.4 2,735,764 - -1.3 2,735,764 - +0.1 2,735,795 + -0.0 2,735,795 + +0.8 2,735,796 - +0.4 2,735,844 - +0.8 2,735,867 + -0.9 2,735,867 + -0.0 2,735,868 - +1.0 2,735,868 - -0.1 2,736,032 + SMc02031 0.15 -0.1 2,736,033 - SMc02031 0.15 +1.6 2,736,186 + SMc02031 0.30 +0.8 2,736,186 + SMc02031 0.30 -0.3 2,736,186 + SMc02031 0.30 -0.3 2,736,187 - SMc02031 0.30 -1.1 2,736,259 - SMc02031 0.37 -0.5 2,736,259 - SMc02031 0.37 -0.7 2,736,259 - SMc02031 0.37 -2.6 2,736,294 + SMc02031 0.40 -0.3 2,736,295 - SMc02031 0.40 +0.7 2,736,623 + SMc02031 0.71 -1.0 2,736,677 + SMc02031 0.77 -1.2 2,736,678 - SMc02031 0.77 -1.0 2,736,678 - SMc02031 0.77 -0.2 2,736,916 + -0.3 2,737,046 + -0.8 2,737,078 + +2.0 2,737,079 - +0.5 2,737,419 + SMc02032 0.25 -1.2 2,737,419 + SMc02032 0.25 +0.4 2,737,667 + SMc02032 0.42 -4.8 2,737,668 - SMc02032 0.42 +0.1
Or see this region's nucleotide sequence