Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01648 and SMc01649 are separated by 140 nucleotides SMc01649 and SMc01650 are separated by 7 nucleotides SMc01650 and SMc01651 are separated by 119 nucleotides
SMc01648: SMc01648 - hypothetical protein, at 2,444,583 to 2,446,580
SMc01648
SMc01649: SMc01649 - hypothetical protein, at 2,446,721 to 2,447,125
SMc01649
SMc01650: SMc01650 - esterase/lipase, at 2,447,133 to 2,448,056
SMc01650
SMc01651: SMc01651 - transcriptional regulator, at 2,448,176 to 2,449,084
SMc01651
Position (kb)
2447
2448
2449 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2446.215 kb on + strand, within SMc01648 at 2446.215 kb on + strand, within SMc01648 at 2446.216 kb on - strand, within SMc01648 at 2446.217 kb on + strand, within SMc01648 at 2446.217 kb on + strand, within SMc01648 at 2446.302 kb on - strand, within SMc01648 at 2446.669 kb on + strand at 2446.670 kb on - strand at 2446.693 kb on + strand at 2446.875 kb on - strand, within SMc01649 at 2446.906 kb on + strand, within SMc01649 at 2446.907 kb on - strand, within SMc01649 at 2446.907 kb on - strand, within SMc01649 at 2446.907 kb on - strand, within SMc01649 at 2446.975 kb on + strand, within SMc01649 at 2446.976 kb on - strand, within SMc01649 at 2446.976 kb on - strand, within SMc01649 at 2446.976 kb on - strand, within SMc01649 at 2446.976 kb on - strand, within SMc01649 at 2447.052 kb on + strand, within SMc01649 at 2447.052 kb on + strand, within SMc01649 at 2447.053 kb on - strand, within SMc01649 at 2447.058 kb on + strand, within SMc01649 at 2447.059 kb on - strand, within SMc01649 at 2447.059 kb on - strand, within SMc01649 at 2447.059 kb on - strand, within SMc01649 at 2447.251 kb on + strand, within SMc01650 at 2447.252 kb on - strand, within SMc01650 at 2447.291 kb on - strand, within SMc01650 at 2447.323 kb on + strand, within SMc01650 at 2447.338 kb on + strand, within SMc01650 at 2447.473 kb on + strand, within SMc01650 at 2447.474 kb on - strand, within SMc01650 at 2447.474 kb on - strand, within SMc01650 at 2447.474 kb on - strand, within SMc01650 at 2447.474 kb on - strand, within SMc01650 at 2447.474 kb on - strand, within SMc01650 at 2447.509 kb on + strand, within SMc01650 at 2447.509 kb on + strand, within SMc01650 at 2447.563 kb on - strand, within SMc01650 at 2447.595 kb on - strand, within SMc01650 at 2447.798 kb on + strand, within SMc01650 at 2447.799 kb on - strand, within SMc01650 at 2447.799 kb on - strand, within SMc01650 at 2447.800 kb on + strand, within SMc01650 at 2447.800 kb on + strand, within SMc01650 at 2447.842 kb on + strand, within SMc01650 at 2447.932 kb on + strand, within SMc01650 at 2447.933 kb on - strand, within SMc01650 at 2447.933 kb on - strand, within SMc01650 at 2447.933 kb on - strand, within SMc01650 at 2447.933 kb on - strand, within SMc01650 at 2447.933 kb on - strand, within SMc01650 at 2447.980 kb on + strand at 2447.980 kb on + strand at 2448.080 kb on - strand at 2448.166 kb on + strand at 2448.204 kb on - strand at 2448.793 kb on + strand, within SMc01651 at 2448.793 kb on + strand, within SMc01651
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 2,446,215 + SMc01648 0.82 -1.0 2,446,215 + SMc01648 0.82 -0.6 2,446,216 - SMc01648 0.82 +0.2 2,446,217 + SMc01648 0.82 -0.7 2,446,217 + SMc01648 0.82 -2.6 2,446,302 - SMc01648 0.86 -1.1 2,446,669 + +0.8 2,446,670 - +1.6 2,446,693 + +0.3 2,446,875 - SMc01649 0.38 +0.8 2,446,906 + SMc01649 0.46 +0.5 2,446,907 - SMc01649 0.46 -0.5 2,446,907 - SMc01649 0.46 -0.1 2,446,907 - SMc01649 0.46 -1.1 2,446,975 + SMc01649 0.63 -0.1 2,446,976 - SMc01649 0.63 +0.2 2,446,976 - SMc01649 0.63 -0.7 2,446,976 - SMc01649 0.63 +0.0 2,446,976 - SMc01649 0.63 -0.2 2,447,052 + SMc01649 0.82 -0.2 2,447,052 + SMc01649 0.82 -1.0 2,447,053 - SMc01649 0.82 +0.3 2,447,058 + SMc01649 0.83 +1.4 2,447,059 - SMc01649 0.83 +0.5 2,447,059 - SMc01649 0.83 -0.6 2,447,059 - SMc01649 0.83 +0.4 2,447,251 + SMc01650 0.13 -0.0 2,447,252 - SMc01650 0.13 -0.1 2,447,291 - SMc01650 0.17 +0.5 2,447,323 + SMc01650 0.21 +0.5 2,447,338 + SMc01650 0.22 -0.0 2,447,473 + SMc01650 0.37 +0.0 2,447,474 - SMc01650 0.37 -0.5 2,447,474 - SMc01650 0.37 +0.2 2,447,474 - SMc01650 0.37 -0.6 2,447,474 - SMc01650 0.37 -0.3 2,447,474 - SMc01650 0.37 +0.4 2,447,509 + SMc01650 0.41 +1.6 2,447,509 + SMc01650 0.41 +1.9 2,447,563 - SMc01650 0.47 -1.0 2,447,595 - SMc01650 0.50 +0.6 2,447,798 + SMc01650 0.72 +0.5 2,447,799 - SMc01650 0.72 -0.4 2,447,799 - SMc01650 0.72 -0.3 2,447,800 + SMc01650 0.72 +0.5 2,447,800 + SMc01650 0.72 +0.5 2,447,842 + SMc01650 0.77 -0.2 2,447,932 + SMc01650 0.86 +2.4 2,447,933 - SMc01650 0.87 -0.1 2,447,933 - SMc01650 0.87 +0.3 2,447,933 - SMc01650 0.87 -0.8 2,447,933 - SMc01650 0.87 -0.5 2,447,933 - SMc01650 0.87 +0.7 2,447,980 + -0.5 2,447,980 + +0.2 2,448,080 - -0.1 2,448,166 + -0.7 2,448,204 - -1.3 2,448,793 + SMc01651 0.68 +0.8 2,448,793 + SMc01651 0.68 +0.3
Or see this region's nucleotide sequence