Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01274 and SMc01273 are separated by 33 nucleotides SMc01273 and SMc01272 are separated by 16 nucleotides SMc01272 and SMc01271 are separated by 22 nucleotides SMc01271 and SMc01270 are separated by 73 nucleotides
SMc01274: SMc01274 - camphor resistance protein CrcB, at 1,501,575 to 1,501,952
SMc01274
SMc01273: SMc01273 - S-formylglutathione hydrolase, at 1,501,986 to 1,502,819
SMc01273
SMc01272: SMc01272 - hypothetical protein, at 1,502,836 to 1,503,495
SMc01272
SMc01271: SMc01271 - hypothetical protein, at 1,503,518 to 1,503,958
SMc01271
SMc01270: SMc01270 - alcohol dehydrogenase, at 1,504,032 to 1,505,159
SMc01270
Position (kb)
1502
1503
1504 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1501.943 kb on + strand at 1501.943 kb on + strand at 1501.944 kb on - strand at 1501.944 kb on - strand at 1502.045 kb on - strand at 1502.047 kb on + strand at 1502.059 kb on + strand at 1502.081 kb on + strand, within SMc01273 at 1502.082 kb on - strand, within SMc01273 at 1502.150 kb on + strand, within SMc01273 at 1502.150 kb on + strand, within SMc01273 at 1502.222 kb on - strand, within SMc01273 at 1502.222 kb on - strand, within SMc01273 at 1502.222 kb on - strand, within SMc01273 at 1502.254 kb on + strand, within SMc01273 at 1502.254 kb on + strand, within SMc01273 at 1502.394 kb on - strand, within SMc01273 at 1502.456 kb on + strand, within SMc01273 at 1502.456 kb on + strand, within SMc01273 at 1502.457 kb on - strand, within SMc01273 at 1502.457 kb on - strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.580 kb on - strand, within SMc01273 at 1502.618 kb on + strand, within SMc01273 at 1502.618 kb on + strand, within SMc01273 at 1502.619 kb on - strand, within SMc01273 at 1502.677 kb on + strand, within SMc01273 at 1502.770 kb on + strand at 1502.811 kb on + strand at 1503.101 kb on + strand, within SMc01272 at 1503.113 kb on + strand, within SMc01272 at 1503.113 kb on + strand, within SMc01272 at 1503.113 kb on + strand, within SMc01272 at 1503.113 kb on + strand, within SMc01272 at 1503.113 kb on + strand, within SMc01272 at 1503.114 kb on - strand, within SMc01272 at 1503.359 kb on + strand, within SMc01272 at 1503.359 kb on + strand, within SMc01272 at 1503.359 kb on + strand, within SMc01272 at 1503.359 kb on + strand, within SMc01272 at 1503.359 kb on + strand, within SMc01272 at 1503.360 kb on - strand, within SMc01272 at 1503.360 kb on - strand, within SMc01272 at 1503.364 kb on - strand, within SMc01272 at 1503.364 kb on - strand, within SMc01272 at 1503.459 kb on - strand at 1503.459 kb on - strand at 1503.520 kb on - strand at 1503.952 kb on - strand at 1504.037 kb on - strand at 1504.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,501,943 + +0.2 1,501,943 + -0.5 1,501,944 - -0.2 1,501,944 - +0.1 1,502,045 - +1.0 1,502,047 + +0.5 1,502,059 + +0.3 1,502,081 + SMc01273 0.11 +1.7 1,502,082 - SMc01273 0.12 +0.4 1,502,150 + SMc01273 0.20 +1.4 1,502,150 + SMc01273 0.20 +0.8 1,502,222 - SMc01273 0.28 +0.8 1,502,222 - SMc01273 0.28 -0.1 1,502,222 - SMc01273 0.28 +1.4 1,502,254 + SMc01273 0.32 +0.9 1,502,254 + SMc01273 0.32 +2.5 1,502,394 - SMc01273 0.49 +0.9 1,502,456 + SMc01273 0.56 +1.0 1,502,456 + SMc01273 0.56 +2.2 1,502,457 - SMc01273 0.56 +2.1 1,502,457 - SMc01273 0.56 +0.7 1,502,458 + SMc01273 0.57 +0.9 1,502,458 + SMc01273 0.57 +1.6 1,502,458 + SMc01273 0.57 +1.6 1,502,458 + SMc01273 0.57 +0.8 1,502,458 + SMc01273 0.57 +0.6 1,502,458 + SMc01273 0.57 +0.8 1,502,458 + SMc01273 0.57 +4.2 1,502,458 + SMc01273 0.57 +1.3 1,502,458 + SMc01273 0.57 -0.6 1,502,459 - SMc01273 0.57 +0.6 1,502,459 - SMc01273 0.57 +0.6 1,502,459 - SMc01273 0.57 +0.4 1,502,459 - SMc01273 0.57 +0.7 1,502,464 + SMc01273 0.57 +0.5 1,502,464 + SMc01273 0.57 +0.5 1,502,464 + SMc01273 0.57 +0.7 1,502,464 + SMc01273 0.57 +0.7 1,502,464 + SMc01273 0.57 +0.1 1,502,464 + SMc01273 0.57 +1.3 1,502,464 + SMc01273 0.57 +1.0 1,502,464 + SMc01273 0.57 +1.0 1,502,464 + SMc01273 0.57 +0.7 1,502,465 - SMc01273 0.57 +0.7 1,502,465 - SMc01273 0.57 +0.1 1,502,465 - SMc01273 0.57 +0.9 1,502,465 - SMc01273 0.57 +1.7 1,502,465 - SMc01273 0.57 +0.6 1,502,580 - SMc01273 0.71 +1.5 1,502,618 + SMc01273 0.76 -0.0 1,502,618 + SMc01273 0.76 +1.2 1,502,619 - SMc01273 0.76 +0.8 1,502,677 + SMc01273 0.83 +0.7 1,502,770 + +1.0 1,502,811 + -0.4 1,503,101 + SMc01272 0.40 +0.3 1,503,113 + SMc01272 0.42 +1.1 1,503,113 + SMc01272 0.42 -0.6 1,503,113 + SMc01272 0.42 +0.5 1,503,113 + SMc01272 0.42 -0.1 1,503,113 + SMc01272 0.42 +0.1 1,503,114 - SMc01272 0.42 -2.1 1,503,359 + SMc01272 0.79 +0.6 1,503,359 + SMc01272 0.79 +1.3 1,503,359 + SMc01272 0.79 +0.8 1,503,359 + SMc01272 0.79 +0.7 1,503,359 + SMc01272 0.79 -0.0 1,503,360 - SMc01272 0.79 +0.7 1,503,360 - SMc01272 0.79 +0.5 1,503,364 - SMc01272 0.80 +1.0 1,503,364 - SMc01272 0.80 +0.1 1,503,459 - -0.9 1,503,459 - -0.9 1,503,520 - +0.1 1,503,952 - -1.2 1,504,037 - +0.4 1,504,037 - +0.4
Or see this region's nucleotide sequence