Strain Fitness in Sinorhizobium meliloti 1021 around SMc01260
Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,514,664 | + | SMc01261 | 0.38 | -1.3 | |
1,514,868 | + | SMc01261 | 0.53 | -0.1 | |
1,515,197 | - | SMc01261 | 0.76 | +0.1 | |
1,515,432 | + | +0.7 | |||
1,515,432 | + | -3.5 | |||
1,515,487 | + | +0.2 | |||
1,515,487 | + | +0.0 | |||
1,515,488 | - | -0.4 | |||
1,515,534 | - | -0.4 | |||
1,515,537 | - | -1.5 | |||
1,515,537 | - | -0.6 | |||
1,515,578 | + | +0.9 | |||
1,515,636 | + | -1.6 | |||
1,515,637 | - | -1.7 | |||
1,515,637 | - | -2.3 | |||
1,515,642 | - | -2.2 | |||
1,515,696 | + | SMc01260 | 0.18 | -0.2 | |
1,515,697 | - | SMc01260 | 0.18 | -0.4 | |
1,515,697 | - | SMc01260 | 0.18 | -2.6 | |
1,515,772 | + | SMc01260 | 0.37 | -1.0 | |
1,515,773 | - | SMc01260 | 0.38 | +0.5 | |
1,515,840 | + | SMc01260 | 0.55 | -2.1 | |
1,515,841 | - | SMc01260 | 0.55 | -1.2 | |
1,515,947 | + | SMc01260 | 0.83 | -1.3 | |
1,515,947 | + | SMc01260 | 0.83 | -1.3 | |
1,515,947 | + | SMc01260 | 0.83 | -1.9 | |
1,515,948 | - | SMc01260 | 0.83 | -1.2 | |
1,516,080 | - | +0.6 | |||
1,516,417 | + | SMc01259 | 0.38 | -0.3 | |
1,516,417 | + | SMc01259 | 0.38 | -2.0 | |
1,516,502 | + | SMc01259 | 0.55 | +0.5 | |
1,516,503 | - | SMc01259 | 0.56 | -0.5 | |
1,516,717 | + | -0.3 | |||
1,516,718 | - | +0.8 | |||
1,516,718 | - | -0.0 | |||
1,516,930 | + | SMc01258 | 0.21 | +0.2 | |
1,516,931 | - | SMc01258 | 0.21 | +0.1 |
Or see this region's nucleotide sequence