Strain Fitness in Sinorhizobium meliloti 1021 around SMc00856

Experiment: Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00857 and SMc00856 are separated by 140 nucleotidesSMc00856 and SMc00855 are separated by 126 nucleotides SMc00857: SMc00857 - protease, at 929,794 to 930,660 SMc00857 SMc00856: SMc00856 - hypothetical protein, at 930,801 to 930,992 SMc00856 SMc00855: SMc00855 - glycyl-tRNA synthetase subunit alpha, at 931,119 to 932,054 SMc00855 Position (kb) 930 931Strain fitness (log2 ratio) -1 0 1at 930.024 kb on + strand, within SMc00857at 930.024 kb on + strand, within SMc00857at 930.024 kb on + strand, within SMc00857at 930.028 kb on + strand, within SMc00857at 930.109 kb on + strand, within SMc00857at 930.109 kb on + strand, within SMc00857at 930.110 kb on - strand, within SMc00857at 930.110 kb on - strand, within SMc00857at 930.238 kb on + strand, within SMc00857at 930.967 kb on - strand, within SMc00856

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml
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930,024 + SMc00857 0.27 +0.7
930,024 + SMc00857 0.27 +0.4
930,024 + SMc00857 0.27 +0.3
930,028 + SMc00857 0.27 +0.2
930,109 + SMc00857 0.36 +0.5
930,109 + SMc00857 0.36 +0.1
930,110 - SMc00857 0.36 +0.6
930,110 - SMc00857 0.36 -0.3
930,238 + SMc00857 0.51 +1.3
930,967 - SMc00856 0.86 -1.1

Or see this region's nucleotide sequence