Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00400 and SMc00401 overlap by 1 nucleotides SMc00401 and SMc00402 are separated by 48 nucleotides
SMc00400: SMc00400 - signal peptide protein, at 349,932 to 351,059
SMc00400
SMc00401: SMc00401 - hypothetical protein, at 351,059 to 352,609
SMc00401
SMc00402: SMc00402 - signal peptide protein, at 352,658 to 353,938
SMc00402
Position (kb) 351
352
353 Strain fitness (log2 ratio) -2
-1
0
1
2 at 350.254 kb on + strand, within SMc00400 at 350.254 kb on + strand, within SMc00400 at 350.515 kb on + strand, within SMc00400 at 350.516 kb on - strand, within SMc00400 at 350.516 kb on - strand, within SMc00400 at 350.570 kb on - strand, within SMc00400 at 350.570 kb on - strand, within SMc00400 at 350.707 kb on + strand, within SMc00400 at 351.016 kb on - strand at 351.159 kb on - strand at 351.649 kb on + strand, within SMc00401 at 351.927 kb on + strand, within SMc00401 at 351.928 kb on - strand, within SMc00401 at 351.986 kb on - strand, within SMc00401 at 351.986 kb on - strand, within SMc00401 at 351.987 kb on + strand, within SMc00401 at 351.987 kb on + strand, within SMc00401 at 351.987 kb on + strand, within SMc00401 at 351.987 kb on + strand, within SMc00401 at 351.987 kb on + strand, within SMc00401 at 351.988 kb on - strand, within SMc00401 at 351.988 kb on - strand, within SMc00401 at 351.988 kb on - strand, within SMc00401 at 352.053 kb on + strand, within SMc00401 at 352.053 kb on + strand, within SMc00401 at 352.054 kb on - strand, within SMc00401 at 352.224 kb on + strand, within SMc00401 at 352.224 kb on + strand, within SMc00401 at 352.224 kb on + strand, within SMc00401 at 352.225 kb on - strand, within SMc00401 at 352.659 kb on + strand at 352.659 kb on + strand at 352.681 kb on + strand at 352.834 kb on - strand, within SMc00402 at 352.834 kb on - strand at 352.834 kb on - strand, within SMc00402 at 352.964 kb on - strand, within SMc00402 at 352.988 kb on - strand, within SMc00402 at 352.989 kb on + strand, within SMc00402 at 352.989 kb on + strand, within SMc00402 at 352.990 kb on - strand, within SMc00402 at 353.001 kb on + strand, within SMc00402 at 353.001 kb on + strand, within SMc00402 at 353.001 kb on + strand, within SMc00402 at 353.002 kb on - strand, within SMc00402 at 353.130 kb on + strand, within SMc00402 at 353.278 kb on - strand, within SMc00402 at 353.571 kb on + strand, within SMc00402 at 353.572 kb on - strand, within SMc00402 at 353.586 kb on + strand, within SMc00402 at 353.587 kb on - strand, within SMc00402
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 350,254 + SMc00400 0.29 -0.3 350,254 + SMc00400 0.29 -1.8 350,515 + SMc00400 0.52 -0.1 350,516 - SMc00400 0.52 +0.8 350,516 - SMc00400 0.52 +0.5 350,570 - SMc00400 0.57 +0.9 350,570 - SMc00400 0.57 +0.6 350,707 + SMc00400 0.69 -0.7 351,016 - -0.2 351,159 - +0.2 351,649 + SMc00401 0.38 +1.6 351,927 + SMc00401 0.56 +0.2 351,928 - SMc00401 0.56 +0.1 351,986 - SMc00401 0.60 -0.4 351,986 - SMc00401 0.60 +0.1 351,987 + SMc00401 0.60 +1.2 351,987 + SMc00401 0.60 -0.7 351,987 + SMc00401 0.60 -0.0 351,987 + SMc00401 0.60 +1.1 351,987 + SMc00401 0.60 -0.2 351,988 - SMc00401 0.60 +0.5 351,988 - SMc00401 0.60 -0.1 351,988 - SMc00401 0.60 +1.3 352,053 + SMc00401 0.64 +0.6 352,053 + SMc00401 0.64 -2.1 352,054 - SMc00401 0.64 -1.6 352,224 + SMc00401 0.75 +1.5 352,224 + SMc00401 0.75 +0.2 352,224 + SMc00401 0.75 +0.4 352,225 - SMc00401 0.75 -0.1 352,659 + +1.0 352,659 + -0.2 352,681 + +0.2 352,834 - SMc00402 0.14 -0.7 352,834 - -0.0 352,834 - SMc00402 0.14 -0.9 352,964 - SMc00402 0.24 +0.4 352,988 - SMc00402 0.26 +0.0 352,989 + SMc00402 0.26 -0.4 352,989 + SMc00402 0.26 +0.8 352,990 - SMc00402 0.26 -0.5 353,001 + SMc00402 0.27 +0.0 353,001 + SMc00402 0.27 -1.4 353,001 + SMc00402 0.27 -0.2 353,002 - SMc00402 0.27 -0.3 353,130 + SMc00402 0.37 -1.6 353,278 - SMc00402 0.48 -0.6 353,571 + SMc00402 0.71 +0.9 353,572 - SMc00402 0.71 +0.8 353,586 + SMc00402 0.72 +2.6 353,587 - SMc00402 0.73 -0.0
Or see this region's nucleotide sequence