Strain Fitness in Sinorhizobium meliloti 1021 around SMa2349
Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,322,062 | - | +1.5 | |||
1,322,245 | + | SMa2347 | 0.33 | +0.0 | |
1,322,245 | + | SMa2347 | 0.33 | -0.0 | |
1,322,246 | - | SMa2347 | 0.33 | +1.0 | |
1,322,388 | - | SMa2347 | 0.54 | -0.1 | |
1,322,391 | + | SMa2347 | 0.54 | -0.9 | |
1,322,392 | - | SMa2347 | 0.54 | -0.3 | |
1,322,647 | - | -0.4 | |||
1,322,647 | - | -1.1 | |||
1,322,732 | + | +1.0 | |||
1,322,816 | - | +0.2 | |||
1,322,862 | - | -2.0 | |||
1,323,002 | - | +2.0 | |||
1,323,015 | + | -1.6 | |||
1,323,022 | + | -0.6 | |||
1,323,023 | - | +0.0 | |||
1,323,023 | - | +0.2 | |||
1,323,040 | + | -1.8 | |||
1,323,303 | + | SMa2349 | 0.37 | -1.2 | |
1,323,558 | + | SMa2349 | 0.77 | -0.1 | |
1,323,640 | - | SMa2349 | 0.89 | -1.0 | |
1,323,642 | - | SMa2349 | 0.90 | -0.2 | |
1,323,658 | + | -0.4 | |||
1,323,720 | + | +0.5 | |||
1,323,909 | - | SMa2351 | 0.21 | +2.1 | |
1,323,929 | + | SMa2351 | 0.24 | -0.4 | |
1,323,966 | + | SMa2351 | 0.27 | +0.0 | |
1,323,967 | - | SMa2351 | 0.28 | -1.0 | |
1,324,066 | - | SMa2351 | 0.38 | -0.7 | |
1,324,066 | - | SMa2351 | 0.38 | +0.3 | |
1,324,072 | - | SMa2351 | 0.39 | +0.2 | |
1,324,095 | - | SMa2351 | 0.41 | -0.1 | |
1,324,095 | - | SMa2351 | 0.41 | -0.9 | |
1,324,413 | + | SMa2351 | 0.74 | +0.9 |
Or see this region's nucleotide sequence