Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2061 and SMa2063 are separated by 6 nucleotides SMa2063 and SMa2065 are separated by 11 nucleotides SMa2065 and SMa2067 are separated by 359 nucleotides
SMa2061: SMa2061 - hypothetical protein, at 1,162,596 to 1,164,041
SMa2061
SMa2063: SMa2063 - sensor histidine kinase, at 1,164,048 to 1,165,091
SMa2063
SMa2065: SMa2065 - hypothetical protein, at 1,165,103 to 1,165,492
SMa2065
SMa2067: SMa2067 - sulfate/thiosulfate binding protein, at 1,165,852 to 1,166,895
SMa2067
Position (kb)
1164
1165
1166 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1163.202 kb on + strand, within SMa2061 at 1163.235 kb on - strand, within SMa2061 at 1163.235 kb on - strand, within SMa2061 at 1163.375 kb on + strand, within SMa2061 at 1163.431 kb on + strand, within SMa2061 at 1163.431 kb on + strand, within SMa2061 at 1163.473 kb on - strand, within SMa2061 at 1163.473 kb on - strand, within SMa2061 at 1164.096 kb on + strand at 1164.234 kb on - strand, within SMa2063 at 1164.264 kb on + strand, within SMa2063 at 1164.384 kb on + strand, within SMa2063 at 1164.384 kb on + strand, within SMa2063 at 1164.385 kb on - strand, within SMa2063 at 1164.387 kb on + strand, within SMa2063 at 1164.388 kb on - strand, within SMa2063 at 1164.419 kb on - strand, within SMa2063 at 1164.521 kb on - strand, within SMa2063 at 1164.634 kb on + strand, within SMa2063 at 1164.634 kb on + strand, within SMa2063 at 1164.635 kb on - strand, within SMa2063 at 1164.635 kb on - strand, within SMa2063 at 1164.635 kb on - strand, within SMa2063 at 1164.715 kb on + strand, within SMa2063 at 1164.825 kb on + strand, within SMa2063 at 1164.826 kb on - strand, within SMa2063 at 1164.826 kb on - strand, within SMa2063 at 1164.895 kb on + strand, within SMa2063 at 1164.896 kb on - strand, within SMa2063 at 1164.966 kb on + strand, within SMa2063 at 1164.987 kb on - strand at 1165.046 kb on - strand at 1165.087 kb on + strand at 1165.089 kb on + strand at 1165.089 kb on + strand at 1165.090 kb on - strand at 1165.090 kb on - strand at 1165.196 kb on + strand, within SMa2065 at 1165.245 kb on + strand, within SMa2065 at 1165.246 kb on - strand, within SMa2065 at 1165.275 kb on + strand, within SMa2065 at 1165.276 kb on - strand, within SMa2065 at 1165.276 kb on - strand, within SMa2065 at 1165.276 kb on - strand, within SMa2065 at 1165.450 kb on - strand, within SMa2065 at 1165.450 kb on - strand, within SMa2065 at 1165.490 kb on + strand at 1165.491 kb on - strand at 1165.491 kb on - strand at 1165.491 kb on - strand at 1165.675 kb on + strand at 1165.747 kb on + strand at 1165.747 kb on + strand at 1165.748 kb on - strand at 1165.748 kb on - strand at 1165.748 kb on - strand at 1165.781 kb on + strand at 1165.781 kb on + strand at 1165.781 kb on + strand at 1165.782 kb on - strand at 1165.782 kb on - strand at 1165.853 kb on + strand at 1165.854 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,163,202 + SMa2061 0.42 +0.2 1,163,235 - SMa2061 0.44 +0.7 1,163,235 - SMa2061 0.44 -0.0 1,163,375 + SMa2061 0.54 +0.1 1,163,431 + SMa2061 0.58 -1.0 1,163,431 + SMa2061 0.58 -0.3 1,163,473 - SMa2061 0.61 +4.0 1,163,473 - SMa2061 0.61 -0.4 1,164,096 + -1.1 1,164,234 - SMa2063 0.18 +0.5 1,164,264 + SMa2063 0.21 -0.4 1,164,384 + SMa2063 0.32 -0.2 1,164,384 + SMa2063 0.32 +0.2 1,164,385 - SMa2063 0.32 -0.7 1,164,387 + SMa2063 0.32 -0.8 1,164,388 - SMa2063 0.33 -1.5 1,164,419 - SMa2063 0.36 +0.8 1,164,521 - SMa2063 0.45 +1.1 1,164,634 + SMa2063 0.56 -0.7 1,164,634 + SMa2063 0.56 -0.5 1,164,635 - SMa2063 0.56 -0.1 1,164,635 - SMa2063 0.56 -1.6 1,164,635 - SMa2063 0.56 +1.0 1,164,715 + SMa2063 0.64 -0.6 1,164,825 + SMa2063 0.74 -1.1 1,164,826 - SMa2063 0.75 -1.2 1,164,826 - SMa2063 0.75 +1.0 1,164,895 + SMa2063 0.81 -0.8 1,164,896 - SMa2063 0.81 -0.1 1,164,966 + SMa2063 0.88 -1.0 1,164,987 - -0.3 1,165,046 - +1.8 1,165,087 + +2.4 1,165,089 + +0.3 1,165,089 + -1.1 1,165,090 - +2.0 1,165,090 - -1.1 1,165,196 + SMa2065 0.24 -0.5 1,165,245 + SMa2065 0.36 +0.1 1,165,246 - SMa2065 0.37 +0.0 1,165,275 + SMa2065 0.44 -0.7 1,165,276 - SMa2065 0.44 -0.3 1,165,276 - SMa2065 0.44 +0.4 1,165,276 - SMa2065 0.44 +0.6 1,165,450 - SMa2065 0.89 +1.3 1,165,450 - SMa2065 0.89 +1.8 1,165,490 + +0.3 1,165,491 - +1.0 1,165,491 - +3.3 1,165,491 - +0.6 1,165,675 + -0.2 1,165,747 + -1.4 1,165,747 + +1.2 1,165,748 - -0.2 1,165,748 - -0.9 1,165,748 - +0.2 1,165,781 + -0.2 1,165,781 + -1.3 1,165,781 + -2.6 1,165,782 - +0.5 1,165,782 - +0.0 1,165,853 + +0.2 1,165,854 - +0.2
Or see this region's nucleotide sequence