Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1742 and SMa1745 overlap by 4 nucleotides SMa1745 and SMa1746 overlap by 58 nucleotides
SMa1742: SMa1742 - Fe3+-siderophore ABC transporter permease, at 985,905 to 986,942
SMa1742
SMa1745: SMa1745 - ABC transporter permease, Fe3+-siderophore transport system, at 986,939 to 988,039
SMa1745
SMa1746: SMa1746 - ABC transporter substrate-binding protein, at 987,982 to 988,983
SMa1746
Position (kb) 986
987
988
989 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 985.942 kb on + strand at 985.943 kb on - strand at 985.943 kb on - strand at 985.944 kb on + strand at 985.951 kb on + strand at 985.951 kb on + strand at 985.983 kb on + strand at 985.984 kb on - strand at 986.201 kb on + strand, within SMa1742 at 986.201 kb on + strand, within SMa1742 at 986.251 kb on - strand, within SMa1742 at 986.410 kb on + strand, within SMa1742 at 986.530 kb on - strand at 986.574 kb on + strand, within SMa1742 at 986.574 kb on + strand, within SMa1742 at 986.574 kb on + strand, within SMa1742 at 986.574 kb on + strand, within SMa1742 at 986.575 kb on - strand, within SMa1742 at 986.575 kb on - strand, within SMa1742 at 986.649 kb on + strand, within SMa1742 at 986.689 kb on - strand, within SMa1742 at 986.776 kb on - strand, within SMa1742 at 986.776 kb on - strand, within SMa1742 at 987.014 kb on + strand at 987.015 kb on - strand at 987.015 kb on - strand at 987.015 kb on - strand at 987.150 kb on - strand, within SMa1745 at 987.332 kb on + strand, within SMa1745 at 987.333 kb on - strand, within SMa1745 at 987.409 kb on + strand, within SMa1745 at 987.588 kb on + strand, within SMa1745 at 987.589 kb on - strand, within SMa1745 at 987.589 kb on - strand, within SMa1745 at 987.589 kb on - strand, within SMa1745 at 987.596 kb on + strand, within SMa1745 at 987.597 kb on - strand, within SMa1745 at 987.796 kb on + strand, within SMa1745 at 988.023 kb on - strand at 988.023 kb on - strand at 988.071 kb on + strand at 988.090 kb on + strand, within SMa1746 at 988.125 kb on + strand, within SMa1746 at 988.125 kb on + strand, within SMa1746 at 988.125 kb on + strand, within SMa1746 at 988.126 kb on - strand, within SMa1746 at 988.126 kb on - strand, within SMa1746 at 988.178 kb on + strand, within SMa1746 at 988.179 kb on - strand, within SMa1746 at 988.182 kb on + strand, within SMa1746 at 988.284 kb on + strand, within SMa1746 at 988.285 kb on - strand, within SMa1746 at 988.285 kb on - strand at 988.447 kb on + strand, within SMa1746 at 988.447 kb on + strand, within SMa1746 at 988.450 kb on - strand, within SMa1746 at 988.574 kb on + strand, within SMa1746 at 988.574 kb on + strand, within SMa1746 at 988.598 kb on + strand, within SMa1746 at 988.886 kb on + strand at 988.893 kb on + strand at 988.942 kb on + strand at 988.942 kb on + strand at 988.943 kb on - strand at 989.027 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 985,942 + -0.3 985,943 - -0.1 985,943 - -0.0 985,944 + -1.2 985,951 + +0.3 985,951 + +0.1 985,983 + +0.0 985,984 - +0.2 986,201 + SMa1742 0.29 -0.2 986,201 + SMa1742 0.29 -2.3 986,251 - SMa1742 0.33 +0.3 986,410 + SMa1742 0.49 -2.6 986,530 - +3.6 986,574 + SMa1742 0.64 +2.1 986,574 + SMa1742 0.64 -0.2 986,574 + SMa1742 0.64 -0.6 986,574 + SMa1742 0.64 -0.1 986,575 - SMa1742 0.65 +0.8 986,575 - SMa1742 0.65 -0.8 986,649 + SMa1742 0.72 +0.4 986,689 - SMa1742 0.76 -1.3 986,776 - SMa1742 0.84 +3.8 986,776 - SMa1742 0.84 +0.2 987,014 + -0.8 987,015 - -0.2 987,015 - -0.3 987,015 - +0.4 987,150 - SMa1745 0.19 -0.7 987,332 + SMa1745 0.36 +0.7 987,333 - SMa1745 0.36 -0.2 987,409 + SMa1745 0.43 +0.0 987,588 + SMa1745 0.59 -0.9 987,589 - SMa1745 0.59 -0.2 987,589 - SMa1745 0.59 -1.0 987,589 - SMa1745 0.59 +0.1 987,596 + SMa1745 0.60 -0.4 987,597 - SMa1745 0.60 -1.0 987,796 + SMa1745 0.78 +0.1 988,023 - -0.8 988,023 - +0.3 988,071 + +0.5 988,090 + SMa1746 0.11 -1.9 988,125 + SMa1746 0.14 -1.4 988,125 + SMa1746 0.14 +0.6 988,125 + SMa1746 0.14 -0.4 988,126 - SMa1746 0.14 +0.3 988,126 - SMa1746 0.14 +0.8 988,178 + SMa1746 0.20 -0.4 988,179 - SMa1746 0.20 -3.6 988,182 + SMa1746 0.20 -0.6 988,284 + SMa1746 0.30 +0.6 988,285 - SMa1746 0.30 +0.1 988,285 - +0.6 988,447 + SMa1746 0.46 +0.2 988,447 + SMa1746 0.46 -0.3 988,450 - SMa1746 0.47 -0.5 988,574 + SMa1746 0.59 -0.9 988,574 + SMa1746 0.59 -2.8 988,598 + SMa1746 0.61 -0.7 988,886 + -0.8 988,893 + -0.5 988,942 + +0.6 988,942 + +0.3 988,943 - +0.3 989,027 - -0.3
Or see this region's nucleotide sequence