Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1641 and SMa1643 overlap by 4 nucleotides SMa1643 and SMa1644 are separated by 97 nucleotides SMa1644 and SMa5010 are separated by 177 nucleotides SMa5010 and SMa1646 are separated by 363 nucleotides
SMa1641: SMa1641 - NreB protein, at 914,013 to 915,335
SMa1641
SMa1643: SMa1643 - hypothetical protein, at 915,332 to 915,670
SMa1643
SMa1644: SMa1644 - ABC transporter permease, at 915,768 to 916,487
SMa1644
SMa5010: SMa5010 - hypothetical protein, at 916,665 to 917,003
SMa5010
SMa1646: SMa1646 - ABC transporter ATP-binding protein, at 917,367 to 918,389
SMa1646
Position (kb)
915
916
917 Strain fitness (log2 ratio)
-2
-1
0
1 at 914.908 kb on + strand, within SMa1641 at 914.966 kb on + strand, within SMa1641 at 915.076 kb on - strand, within SMa1641 at 915.565 kb on + strand, within SMa1643 at 915.587 kb on - strand, within SMa1643 at 915.726 kb on - strand at 915.804 kb on + strand at 915.805 kb on - strand at 915.825 kb on - strand at 915.825 kb on - strand at 915.945 kb on + strand, within SMa1644 at 915.945 kb on + strand, within SMa1644 at 915.946 kb on - strand, within SMa1644 at 916.034 kb on - strand, within SMa1644 at 916.064 kb on + strand, within SMa1644 at 916.065 kb on - strand, within SMa1644 at 916.065 kb on - strand, within SMa1644 at 916.451 kb on - strand at 916.453 kb on + strand at 916.454 kb on - strand at 916.454 kb on - strand at 916.571 kb on - strand at 916.678 kb on - strand at 916.687 kb on + strand at 916.724 kb on - strand, within SMa5010 at 916.879 kb on - strand, within SMa5010 at 917.001 kb on + strand at 917.002 kb on - strand at 917.002 kb on - strand at 917.005 kb on + strand at 917.027 kb on + strand at 917.028 kb on - strand at 917.065 kb on - strand at 917.133 kb on + strand at 917.171 kb on + strand at 917.233 kb on + strand at 917.324 kb on - strand at 917.325 kb on + strand at 917.325 kb on + strand at 917.362 kb on + strand at 917.363 kb on - strand at 917.368 kb on + strand at 917.369 kb on - strand at 917.454 kb on - strand at 917.454 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 914,908 + SMa1641 0.68 +1.0 914,966 + SMa1641 0.72 +0.3 915,076 - SMa1641 0.80 -0.7 915,565 + SMa1643 0.69 +0.2 915,587 - SMa1643 0.75 +0.2 915,726 - -0.5 915,804 + -0.6 915,805 - -1.5 915,825 - +1.2 915,825 - -0.3 915,945 + SMa1644 0.25 +0.0 915,945 + SMa1644 0.25 +0.5 915,946 - SMa1644 0.25 -0.2 916,034 - SMa1644 0.37 -1.3 916,064 + SMa1644 0.41 -2.1 916,065 - SMa1644 0.41 -0.7 916,065 - SMa1644 0.41 -1.0 916,451 - +1.3 916,453 + -0.7 916,454 - -0.5 916,454 - +0.2 916,571 - +0.6 916,678 - +0.5 916,687 + -0.4 916,724 - SMa5010 0.17 -0.1 916,879 - SMa5010 0.63 -1.9 917,001 + +0.1 917,002 - +1.0 917,002 - +0.8 917,005 + +0.7 917,027 + -1.0 917,028 - -1.0 917,065 - +0.8 917,133 + +0.5 917,171 + -1.0 917,233 + -2.2 917,324 - +1.3 917,325 + +1.1 917,325 + -0.4 917,362 + +1.3 917,363 - -0.6 917,368 + +0.1 917,369 - +0.3 917,454 - -0.9 917,454 - -0.0
Or see this region's nucleotide sequence