Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1454 and SMa1455 overlap by 19 nucleotides SMa1455 and SMa1456 overlap by 4 nucleotides SMa1456 and SMa1459 are separated by 107 nucleotides
SMa1454: SMa1454 - AraC family transcriptional regulator, at 801,299 to 802,342
SMa1454
SMa1455: SMa1455 - hypothetical protein, at 802,324 to 802,842
SMa1455
SMa1456: SMa1456 - hypothetical protein, at 802,839 to 803,228
SMa1456
SMa1459: SMa1459 - Dehydrogenase, malate/L-lactate family, at 803,336 to 804,340
SMa1459
Position (kb) 802
803
804 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 801.876 kb on - strand, within SMa1454 at 801.876 kb on - strand, within SMa1454 at 801.943 kb on + strand, within SMa1454 at 801.944 kb on - strand, within SMa1454 at 801.988 kb on - strand, within SMa1454 at 801.988 kb on - strand, within SMa1454 at 802.006 kb on + strand, within SMa1454 at 802.007 kb on - strand, within SMa1454 at 802.007 kb on - strand, within SMa1454 at 802.273 kb on + strand at 802.274 kb on - strand at 802.279 kb on + strand at 802.280 kb on - strand at 802.347 kb on + strand at 802.370 kb on + strand at 802.370 kb on + strand at 802.371 kb on - strand at 802.371 kb on - strand at 802.371 kb on - strand at 802.637 kb on + strand, within SMa1455 at 802.637 kb on + strand, within SMa1455 at 802.638 kb on - strand, within SMa1455 at 802.722 kb on - strand, within SMa1455 at 803.176 kb on + strand, within SMa1456 at 803.176 kb on + strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.177 kb on - strand, within SMa1456 at 803.229 kb on - strand at 803.250 kb on + strand at 803.338 kb on - strand at 803.645 kb on - strand, within SMa1459 at 803.846 kb on + strand, within SMa1459 at 803.939 kb on - strand, within SMa1459 at 803.989 kb on + strand, within SMa1459 at 803.989 kb on + strand, within SMa1459 at 803.991 kb on + strand, within SMa1459 at 803.991 kb on + strand, within SMa1459 at 803.992 kb on - strand, within SMa1459 at 803.992 kb on - strand, within SMa1459 at 803.992 kb on - strand, within SMa1459 at 804.190 kb on - strand, within SMa1459 at 804.190 kb on - strand, within SMa1459 at 804.192 kb on + strand, within SMa1459 at 804.192 kb on + strand, within SMa1459
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 801,876 - SMa1454 0.55 -3.3 801,876 - SMa1454 0.55 +0.4 801,943 + SMa1454 0.62 -1.3 801,944 - SMa1454 0.62 +0.0 801,988 - SMa1454 0.66 -0.5 801,988 - SMa1454 0.66 -0.8 802,006 + SMa1454 0.68 -0.4 802,007 - SMa1454 0.68 -0.1 802,007 - SMa1454 0.68 -2.1 802,273 + -1.4 802,274 - +0.8 802,279 + -0.5 802,280 - -0.0 802,347 + -0.5 802,370 + +0.0 802,370 + -2.4 802,371 - -1.4 802,371 - -0.6 802,371 - +0.4 802,637 + SMa1455 0.60 +0.5 802,637 + SMa1455 0.60 +0.7 802,638 - SMa1455 0.61 -0.1 802,722 - SMa1455 0.77 -2.1 803,176 + SMa1456 0.86 -1.6 803,176 + SMa1456 0.86 -0.6 803,177 - SMa1456 0.87 -0.7 803,177 - SMa1456 0.87 -0.6 803,177 - SMa1456 0.87 -2.9 803,177 - SMa1456 0.87 -2.0 803,229 - -0.7 803,250 + -2.1 803,338 - -0.3 803,645 - SMa1459 0.31 -0.9 803,846 + SMa1459 0.51 -1.4 803,939 - SMa1459 0.60 -0.3 803,989 + SMa1459 0.65 -0.4 803,989 + SMa1459 0.65 +0.5 803,991 + SMa1459 0.65 +1.0 803,991 + SMa1459 0.65 +1.6 803,992 - SMa1459 0.65 -1.0 803,992 - SMa1459 0.65 +1.1 803,992 - SMa1459 0.65 +0.7 804,190 - SMa1459 0.85 -1.1 804,190 - SMa1459 0.85 +0.8 804,192 + SMa1459 0.85 +0.1 804,192 + SMa1459 0.85 -0.3
Or see this region's nucleotide sequence