Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1339 and SMa1341 are separated by 1 nucleotides SMa1341 and SMa1344 are separated by 196 nucleotides
SMa1339: SMa1339 - ABC transporter permease, at 732,787 to 733,692
SMa1339
SMa1341: SMa1341 - ABC transporter permease, at 733,694 to 734,653
SMa1341
SMa1344: SMa1344 - ABC transporter ATP-binding protein, at 734,850 to 735,959
SMa1344
Position (kb) 733
734
735 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 733.001 kb on - strand, within SMa1339 at 733.057 kb on + strand, within SMa1339 at 733.213 kb on + strand, within SMa1339 at 733.213 kb on + strand, within SMa1339 at 733.294 kb on + strand, within SMa1339 at 733.294 kb on + strand, within SMa1339 at 733.294 kb on + strand, within SMa1339 at 733.295 kb on - strand, within SMa1339 at 733.295 kb on - strand, within SMa1339 at 733.385 kb on - strand, within SMa1339 at 733.421 kb on - strand, within SMa1339 at 733.421 kb on - strand, within SMa1339 at 733.421 kb on - strand, within SMa1339 at 733.519 kb on + strand, within SMa1339 at 733.520 kb on - strand, within SMa1339 at 733.618 kb on + strand at 733.618 kb on + strand at 733.619 kb on - strand at 733.619 kb on - strand at 733.619 kb on - strand at 733.622 kb on + strand at 733.623 kb on - strand at 733.623 kb on - strand at 733.623 kb on - strand at 733.658 kb on - strand at 733.666 kb on + strand at 733.667 kb on - strand at 733.788 kb on - strand at 733.849 kb on + strand, within SMa1341 at 733.931 kb on + strand, within SMa1341 at 734.065 kb on + strand, within SMa1341 at 734.102 kb on + strand, within SMa1341 at 734.157 kb on + strand, within SMa1341 at 734.197 kb on + strand, within SMa1341 at 734.198 kb on - strand, within SMa1341 at 734.198 kb on - strand, within SMa1341 at 734.248 kb on + strand, within SMa1341 at 734.248 kb on + strand, within SMa1341 at 734.248 kb on + strand, within SMa1341 at 734.249 kb on - strand, within SMa1341 at 734.250 kb on + strand, within SMa1341 at 734.259 kb on - strand, within SMa1341 at 734.259 kb on - strand, within SMa1341 at 734.274 kb on + strand, within SMa1341 at 734.275 kb on - strand, within SMa1341 at 734.275 kb on - strand, within SMa1341 at 734.327 kb on + strand, within SMa1341 at 734.328 kb on - strand, within SMa1341 at 734.328 kb on - strand, within SMa1341 at 734.437 kb on + strand, within SMa1341 at 734.438 kb on - strand, within SMa1341 at 734.677 kb on + strand at 734.678 kb on - strand at 734.708 kb on + strand at 734.708 kb on + strand at 734.708 kb on + strand at 734.758 kb on + strand at 734.759 kb on - strand at 734.777 kb on + strand at 734.778 kb on - strand at 734.778 kb on - strand at 734.866 kb on + strand at 734.867 kb on - strand at 734.987 kb on - strand, within SMa1344 at 735.035 kb on - strand, within SMa1344 at 735.058 kb on + strand, within SMa1344 at 735.058 kb on + strand, within SMa1344 at 735.058 kb on + strand, within SMa1344 at 735.088 kb on + strand, within SMa1344 at 735.088 kb on + strand, within SMa1344 at 735.134 kb on + strand, within SMa1344 at 735.414 kb on + strand, within SMa1344 at 735.414 kb on + strand, within SMa1344 at 735.414 kb on + strand, within SMa1344 at 735.414 kb on + strand, within SMa1344 at 735.415 kb on - strand, within SMa1344 at 735.415 kb on - strand, within SMa1344 at 735.415 kb on - strand, within SMa1344 at 735.419 kb on - strand, within SMa1344 at 735.419 kb on - strand, within SMa1344 at 735.419 kb on - strand, within SMa1344
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 733,001 - SMa1339 0.24 -0.3 733,057 + SMa1339 0.30 +0.6 733,213 + SMa1339 0.47 +0.1 733,213 + SMa1339 0.47 +0.9 733,294 + SMa1339 0.56 +0.6 733,294 + SMa1339 0.56 -0.5 733,294 + SMa1339 0.56 -0.3 733,295 - SMa1339 0.56 +0.3 733,295 - SMa1339 0.56 +1.2 733,385 - SMa1339 0.66 -0.0 733,421 - SMa1339 0.70 +0.9 733,421 - SMa1339 0.70 -0.4 733,421 - SMa1339 0.70 -0.4 733,519 + SMa1339 0.81 +0.2 733,520 - SMa1339 0.81 +0.0 733,618 + -1.0 733,618 + +0.4 733,619 - -0.5 733,619 - -0.0 733,619 - -0.1 733,622 + +1.9 733,623 - +0.5 733,623 - +0.2 733,623 - -2.2 733,658 - +0.3 733,666 + +0.0 733,667 - -0.0 733,788 - +0.7 733,849 + SMa1341 0.16 -1.2 733,931 + SMa1341 0.25 +0.2 734,065 + SMa1341 0.39 +0.2 734,102 + SMa1341 0.42 +1.0 734,157 + SMa1341 0.48 -0.0 734,197 + SMa1341 0.52 +0.3 734,198 - SMa1341 0.53 +0.2 734,198 - SMa1341 0.53 -0.3 734,248 + SMa1341 0.58 -1.7 734,248 + SMa1341 0.58 +0.4 734,248 + SMa1341 0.58 +0.1 734,249 - SMa1341 0.58 -0.4 734,250 + SMa1341 0.58 +0.3 734,259 - SMa1341 0.59 +1.4 734,259 - SMa1341 0.59 -0.3 734,274 + SMa1341 0.60 -1.2 734,275 - SMa1341 0.61 +0.6 734,275 - SMa1341 0.61 +1.0 734,327 + SMa1341 0.66 +0.1 734,328 - SMa1341 0.66 -0.9 734,328 - SMa1341 0.66 +0.5 734,437 + SMa1341 0.77 -0.1 734,438 - SMa1341 0.78 +0.8 734,677 + +0.0 734,678 - +0.2 734,708 + -0.0 734,708 + -0.8 734,708 + +1.1 734,758 + +0.2 734,759 - +1.1 734,777 + -0.4 734,778 - -0.7 734,778 - +1.8 734,866 + -0.7 734,867 - -0.7 734,987 - SMa1344 0.12 -1.4 735,035 - SMa1344 0.17 +0.5 735,058 + SMa1344 0.19 -0.2 735,058 + SMa1344 0.19 -0.2 735,058 + SMa1344 0.19 +0.6 735,088 + SMa1344 0.21 +4.1 735,088 + SMa1344 0.21 +0.2 735,134 + SMa1344 0.26 +0.5 735,414 + SMa1344 0.51 -0.9 735,414 + SMa1344 0.51 -0.0 735,414 + SMa1344 0.51 +0.0 735,414 + SMa1344 0.51 +0.6 735,415 - SMa1344 0.51 -0.5 735,415 - SMa1344 0.51 -0.2 735,415 - SMa1344 0.51 -2.1 735,419 - SMa1344 0.51 +1.0 735,419 - SMa1344 0.51 -0.1 735,419 - SMa1344 0.51 +0.6
Or see this region's nucleotide sequence