Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1038 and SMa1041 are separated by 6 nucleotides SMa1041 and SMa1043 are separated by 19 nucleotides SMa1043 and SMa1045 are separated by 92 nucleotides SMa1045 and SMa1046 overlap by 4 nucleotides
SMa1038: SMa1038 - copper-containing oxidase, at 571,990 to 573,339
SMa1038
SMa1041: SMa1041 - copper oxidase, at 573,346 to 573,858
SMa1041
SMa1043: SMa1043 - hypothetical protein, at 573,878 to 574,162
SMa1043
SMa1045: SMa1045 - hypothetical protein, at 574,255 to 574,542
SMa1045
SMa1046: SMa1046 - adenylate cyclase, at 574,539 to 575,606
SMa1046
Position (kb) 574
575 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 573.324 kb on + strand at 573.324 kb on + strand at 573.324 kb on + strand at 573.324 kb on + strand at 573.324 kb on + strand at 573.325 kb on - strand at 573.325 kb on - strand at 573.325 kb on - strand at 573.366 kb on + strand at 573.366 kb on + strand at 573.366 kb on + strand at 573.366 kb on + strand at 573.367 kb on - strand at 573.367 kb on - strand at 573.389 kb on + strand at 573.389 kb on + strand at 573.389 kb on + strand at 574.141 kb on + strand at 574.141 kb on + strand at 574.142 kb on - strand at 574.160 kb on + strand at 574.160 kb on + strand at 574.352 kb on + strand, within SMa1045 at 574.356 kb on - strand, within SMa1045 at 574.356 kb on - strand, within SMa1045 at 574.405 kb on + strand, within SMa1045 at 574.406 kb on - strand, within SMa1045 at 574.444 kb on + strand, within SMa1045 at 574.484 kb on + strand, within SMa1045 at 574.788 kb on + strand at 574.789 kb on - strand, within SMa1046 at 575.177 kb on - strand, within SMa1046 at 575.244 kb on + strand, within SMa1046 at 575.467 kb on + strand, within SMa1046 at 575.468 kb on - strand, within SMa1046 at 575.468 kb on - strand, within SMa1046 at 575.468 kb on - strand, within SMa1046 at 575.513 kb on + strand at 575.513 kb on + strand at 575.516 kb on + strand at 575.517 kb on - strand at 575.517 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 573,324 + -0.0 573,324 + +0.1 573,324 + -2.1 573,324 + -0.0 573,324 + +0.4 573,325 - -1.1 573,325 - -1.7 573,325 - -0.5 573,366 + -0.1 573,366 + -2.0 573,366 + -1.5 573,366 + -3.5 573,367 - -1.6 573,367 - +1.4 573,389 + +0.3 573,389 + -1.2 573,389 + +0.1 574,141 + +0.6 574,141 + +0.0 574,142 - +0.6 574,160 + -0.7 574,160 + +0.1 574,352 + SMa1045 0.34 -2.0 574,356 - SMa1045 0.35 -1.1 574,356 - SMa1045 0.35 -1.8 574,405 + SMa1045 0.52 +0.0 574,406 - SMa1045 0.52 -0.1 574,444 + SMa1045 0.66 +0.0 574,484 + SMa1045 0.80 -1.0 574,788 + -1.5 574,789 - SMa1046 0.23 -2.7 575,177 - SMa1046 0.60 -0.5 575,244 + SMa1046 0.66 -0.0 575,467 + SMa1046 0.87 -0.3 575,468 - SMa1046 0.87 +0.7 575,468 - SMa1046 0.87 +0.0 575,468 - SMa1046 0.87 -0.4 575,513 + -0.2 575,513 + +0.3 575,516 + +0.3 575,517 - +0.5 575,517 - -0.2
Or see this region's nucleotide sequence