Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0214 and SMa0216 are separated by 31 nucleotides SMa0216 and SMa0217 overlap by 4 nucleotides
SMa0214: SMa0214 - 5-keto-4-deoxyuronate isomerase, at 116,673 to 117,515
SMa0214
SMa0216: SMa0216 - ABC transporter ATP-binding protein, at 117,547 to 118,287
SMa0216
SMa0217: SMa0217 - ABC transporter permease, at 118,284 to 119,363
SMa0217
Position (kb) 117
118
119 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 116.604 kb on + strand at 116.605 kb on - strand at 116.670 kb on + strand at 116.670 kb on + strand at 116.670 kb on + strand at 116.670 kb on + strand at 116.675 kb on - strand at 116.890 kb on + strand, within SMa0214 at 116.896 kb on + strand at 116.896 kb on + strand, within SMa0214 at 117.013 kb on + strand, within SMa0214 at 117.014 kb on - strand, within SMa0214 at 117.130 kb on + strand, within SMa0214 at 117.130 kb on + strand, within SMa0214 at 117.130 kb on + strand, within SMa0214 at 117.264 kb on - strand, within SMa0214 at 117.387 kb on - strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.486 kb on + strand at 117.487 kb on - strand at 117.487 kb on - strand at 117.509 kb on + strand at 117.509 kb on + strand at 117.510 kb on - strand at 117.510 kb on - strand at 117.589 kb on - strand at 117.657 kb on - strand, within SMa0216 at 117.748 kb on + strand, within SMa0216 at 117.748 kb on + strand, within SMa0216 at 117.801 kb on - strand, within SMa0216 at 117.939 kb on + strand, within SMa0216 at 117.982 kb on - strand, within SMa0216 at 118.017 kb on + strand, within SMa0216 at 118.018 kb on - strand, within SMa0216 at 118.025 kb on + strand, within SMa0216 at 118.025 kb on + strand, within SMa0216 at 118.025 kb on + strand, within SMa0216 at 118.026 kb on - strand, within SMa0216 at 118.100 kb on + strand, within SMa0216 at 118.254 kb on + strand at 118.255 kb on - strand at 118.309 kb on - strand at 118.619 kb on + strand, within SMa0217 at 118.825 kb on + strand, within SMa0217 at 118.825 kb on + strand, within SMa0217 at 118.826 kb on - strand, within SMa0217 at 118.904 kb on + strand, within SMa0217 at 118.905 kb on - strand, within SMa0217 at 118.905 kb on - strand, within SMa0217 at 119.017 kb on + strand, within SMa0217 at 119.017 kb on + strand, within SMa0217 at 119.017 kb on + strand, within SMa0217 at 119.017 kb on + strand, within SMa0217
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 116,604 + -0.7 116,605 - +0.3 116,670 + -0.6 116,670 + -0.7 116,670 + +0.3 116,670 + +1.7 116,675 - +0.7 116,890 + SMa0214 0.26 -0.2 116,896 + +1.0 116,896 + SMa0214 0.26 -0.0 117,013 + SMa0214 0.40 -0.1 117,014 - SMa0214 0.40 -0.5 117,130 + SMa0214 0.54 -0.6 117,130 + SMa0214 0.54 +0.2 117,130 + SMa0214 0.54 -0.1 117,264 - SMa0214 0.70 -0.7 117,387 - SMa0214 0.85 +0.9 117,388 + SMa0214 0.85 +0.1 117,388 + SMa0214 0.85 +2.4 117,388 + SMa0214 0.85 -0.2 117,388 + SMa0214 0.85 +0.6 117,388 + SMa0214 0.85 +0.3 117,388 + SMa0214 0.85 -0.4 117,388 + SMa0214 0.85 +4.7 117,389 - SMa0214 0.85 -0.6 117,389 - SMa0214 0.85 +0.3 117,389 - SMa0214 0.85 -2.2 117,389 - SMa0214 0.85 -1.0 117,486 + +1.2 117,487 - -0.4 117,487 - -1.0 117,509 + -2.1 117,509 + +0.4 117,510 - -2.2 117,510 - +0.0 117,589 - -0.1 117,657 - SMa0216 0.15 +0.1 117,748 + SMa0216 0.27 +0.4 117,748 + SMa0216 0.27 +0.4 117,801 - SMa0216 0.34 +0.5 117,939 + SMa0216 0.53 +0.9 117,982 - SMa0216 0.59 -1.0 118,017 + SMa0216 0.63 +0.4 118,018 - SMa0216 0.64 +1.6 118,025 + SMa0216 0.65 -0.3 118,025 + SMa0216 0.65 -0.1 118,025 + SMa0216 0.65 +0.4 118,026 - SMa0216 0.65 +0.6 118,100 + SMa0216 0.75 -0.1 118,254 + +0.0 118,255 - +0.8 118,309 - -0.1 118,619 + SMa0217 0.31 -2.6 118,825 + SMa0217 0.50 +1.0 118,825 + SMa0217 0.50 -1.2 118,826 - SMa0217 0.50 +0.9 118,904 + SMa0217 0.57 -0.9 118,905 - SMa0217 0.57 +0.2 118,905 - SMa0217 0.57 -0.6 119,017 + SMa0217 0.68 -0.5 119,017 + SMa0217 0.68 +0.3 119,017 + SMa0217 0.68 -1.0 119,017 + SMa0217 0.68 +1.3
Or see this region's nucleotide sequence