Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0116 and SMa0117 overlap by 4 nucleotides SMa0117 and SMa0118 are separated by 226 nucleotides
SMa0116: SMa0116 - DnaJ/CbpA-type protein, at 63,200 to 64,117
SMa0116
SMa0117: SMa0117 - hypothetical protein, at 64,114 to 64,452
SMa0117
SMa0118: SMa0118 - hypothetical protein, at 64,679 to 65,206
SMa0118
Position (kb) 64
65 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 63.121 kb on + strand at 63.127 kb on - strand at 63.180 kb on + strand at 63.216 kb on - strand at 63.223 kb on - strand at 63.239 kb on - strand at 63.269 kb on + strand at 63.269 kb on + strand at 63.356 kb on + strand, within SMa0116 at 63.455 kb on + strand, within SMa0116 at 63.597 kb on - strand, within SMa0116 at 63.597 kb on - strand at 63.597 kb on - strand, within SMa0116 at 63.781 kb on + strand, within SMa0116 at 63.781 kb on + strand, within SMa0116 at 63.782 kb on - strand, within SMa0116 at 63.831 kb on + strand, within SMa0116 at 63.831 kb on + strand, within SMa0116 at 63.831 kb on + strand, within SMa0116 at 63.832 kb on - strand, within SMa0116 at 63.832 kb on - strand, within SMa0116 at 63.844 kb on + strand, within SMa0116 at 63.851 kb on + strand, within SMa0116 at 63.919 kb on + strand, within SMa0116 at 64.082 kb on + strand at 64.157 kb on + strand, within SMa0117 at 64.158 kb on - strand, within SMa0117 at 64.359 kb on + strand, within SMa0117 at 64.400 kb on + strand, within SMa0117 at 64.401 kb on - strand, within SMa0117 at 64.450 kb on + strand at 64.450 kb on + strand at 64.450 kb on + strand at 64.450 kb on + strand at 64.451 kb on - strand at 64.451 kb on - strand at 64.451 kb on - strand at 64.451 kb on - strand at 64.454 kb on + strand at 64.454 kb on + strand at 64.455 kb on - strand at 64.455 kb on - strand at 64.455 kb on - strand at 64.464 kb on + strand at 64.464 kb on + strand at 64.464 kb on + strand at 64.616 kb on + strand at 64.616 kb on + strand at 64.616 kb on + strand at 64.616 kb on + strand at 64.617 kb on - strand at 64.617 kb on - strand at 64.617 kb on - strand at 64.617 kb on - strand at 64.619 kb on - strand at 64.635 kb on - strand at 64.674 kb on + strand at 64.674 kb on + strand at 64.674 kb on + strand at 64.674 kb on + strand at 64.675 kb on - strand at 64.675 kb on - strand at 64.782 kb on - strand, within SMa0118 at 64.876 kb on - strand, within SMa0118 at 64.876 kb on - strand, within SMa0118 at 65.145 kb on + strand, within SMa0118 at 65.145 kb on + strand, within SMa0118 at 65.156 kb on - strand at 65.156 kb on - strand at 65.331 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 63,121 + +0.0 63,127 - -2.3 63,180 + -1.5 63,216 - -1.6 63,223 - +0.0 63,239 - +0.5 63,269 + +0.2 63,269 + -0.1 63,356 + SMa0116 0.17 +0.5 63,455 + SMa0116 0.28 +1.6 63,597 - SMa0116 0.43 +3.0 63,597 - +2.0 63,597 - SMa0116 0.43 -0.1 63,781 + SMa0116 0.63 -1.8 63,781 + SMa0116 0.63 -0.9 63,782 - SMa0116 0.63 +1.0 63,831 + SMa0116 0.69 -0.1 63,831 + SMa0116 0.69 -0.3 63,831 + SMa0116 0.69 -0.7 63,832 - SMa0116 0.69 +0.5 63,832 - SMa0116 0.69 -0.2 63,844 + SMa0116 0.70 +0.7 63,851 + SMa0116 0.71 -0.1 63,919 + SMa0116 0.78 +0.1 64,082 + -0.2 64,157 + SMa0117 0.13 -1.9 64,158 - SMa0117 0.13 -0.1 64,359 + SMa0117 0.72 -0.3 64,400 + SMa0117 0.84 -1.1 64,401 - SMa0117 0.85 +1.3 64,450 + -0.1 64,450 + -1.3 64,450 + -1.0 64,450 + -0.4 64,451 - -0.5 64,451 - +1.6 64,451 - +0.3 64,451 - +1.9 64,454 + -0.3 64,454 + -1.8 64,455 - +0.1 64,455 - -3.0 64,455 - +2.4 64,464 + -1.2 64,464 + +1.0 64,464 + +0.3 64,616 + -0.6 64,616 + +2.0 64,616 + -1.3 64,616 + -0.7 64,617 - -0.4 64,617 - -0.8 64,617 - -1.1 64,617 - +0.3 64,619 - +0.1 64,635 - +2.0 64,674 + +0.4 64,674 + +0.3 64,674 + +0.3 64,674 + -1.4 64,675 - -1.7 64,675 - +0.3 64,782 - SMa0118 0.20 +0.9 64,876 - SMa0118 0.37 -0.3 64,876 - SMa0118 0.37 -0.2 65,145 + SMa0118 0.88 +1.0 65,145 + SMa0118 0.88 -0.5 65,156 - +0.2 65,156 - -0.8 65,331 - +3.9
Or see this region's nucleotide sequence