Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0062 and SMa0063 are separated by 129 nucleotides SMa0063 and SMa0064 are separated by 2 nucleotides SMa0064 and SMa0065 are separated by 62 nucleotides SMa0065 and SMa0067 are separated by 57 nucleotides
SMa0062: SMa0062 - GntR family transcriptional regulator, at 32,634 to 33,323
SMa0062
SMa0063: SMa0063 - GntR family transcriptional regulator, at 33,453 to 34,187
SMa0063
SMa0064: SMa0064 - dehydratase/enolase, at 34,190 to 35,392
SMa0064
SMa0065: SMa0065 - GntR family transcriptional regulator, at 35,455 to 36,147
SMa0065
SMa0067: SMa0067 - ABC transporter substrate-binding protein, at 36,205 to 37,167
SMa0067
Position (kb) 34
35
36 Strain fitness (log2 ratio) -2
-1
0
1
2 at 33.288 kb on + strand at 33.351 kb on + strand at 33.351 kb on + strand at 33.351 kb on + strand at 33.352 kb on - strand at 33.616 kb on + strand, within SMa0063 at 33.642 kb on + strand, within SMa0063 at 33.643 kb on - strand, within SMa0063 at 34.010 kb on + strand, within SMa0063 at 34.064 kb on + strand, within SMa0063 at 34.157 kb on - strand at 34.183 kb on - strand at 34.238 kb on - strand at 34.319 kb on + strand, within SMa0064 at 34.319 kb on + strand, within SMa0064 at 34.319 kb on + strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.320 kb on - strand, within SMa0064 at 34.401 kb on - strand, within SMa0064 at 34.401 kb on - strand, within SMa0064 at 34.401 kb on - strand, within SMa0064 at 34.542 kb on - strand, within SMa0064 at 34.542 kb on - strand, within SMa0064 at 34.542 kb on - strand, within SMa0064 at 34.542 kb on - strand, within SMa0064 at 34.542 kb on - strand, within SMa0064 at 34.542 kb on - strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.565 kb on + strand, within SMa0064 at 34.566 kb on - strand, within SMa0064 at 34.566 kb on - strand, within SMa0064 at 34.567 kb on + strand, within SMa0064 at 34.628 kb on + strand, within SMa0064 at 34.629 kb on - strand, within SMa0064 at 34.629 kb on - strand, within SMa0064 at 34.754 kb on - strand, within SMa0064 at 34.754 kb on - strand, within SMa0064 at 34.899 kb on - strand, within SMa0064 at 35.055 kb on + strand, within SMa0064 at 35.056 kb on - strand, within SMa0064 at 35.234 kb on + strand, within SMa0064 at 35.237 kb on + strand, within SMa0064 at 35.237 kb on + strand, within SMa0064 at 35.237 kb on + strand, within SMa0064 at 35.238 kb on - strand, within SMa0064 at 35.238 kb on - strand, within SMa0064 at 35.250 kb on - strand, within SMa0064 at 35.261 kb on - strand, within SMa0064 at 35.261 kb on - strand, within SMa0064 at 35.597 kb on + strand, within SMa0065 at 35.683 kb on + strand, within SMa0065 at 35.683 kb on + strand, within SMa0065 at 35.683 kb on + strand, within SMa0065 at 35.683 kb on + strand, within SMa0065 at 35.684 kb on - strand, within SMa0065 at 35.684 kb on - strand, within SMa0065 at 35.684 kb on - strand, within SMa0065 at 35.684 kb on - strand, within SMa0065 at 35.684 kb on - strand, within SMa0065 at 36.020 kb on + strand, within SMa0065 at 36.021 kb on - strand, within SMa0065 at 36.021 kb on - strand, within SMa0065 at 36.161 kb on + strand at 36.162 kb on - strand at 36.185 kb on - strand at 36.210 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 33,288 + +0.4 33,351 + +0.7 33,351 + -0.2 33,351 + -0.2 33,352 - +1.7 33,616 + SMa0063 0.22 +0.3 33,642 + SMa0063 0.26 -0.3 33,643 - SMa0063 0.26 -0.2 34,010 + SMa0063 0.76 +0.1 34,064 + SMa0063 0.83 -0.1 34,157 - +0.1 34,183 - +0.3 34,238 - +0.0 34,319 + SMa0064 0.11 +0.3 34,319 + SMa0064 0.11 +0.4 34,319 + SMa0064 0.11 +0.8 34,320 - SMa0064 0.11 +0.0 34,320 - SMa0064 0.11 -0.1 34,320 - SMa0064 0.11 -1.2 34,320 - SMa0064 0.11 -0.1 34,320 - SMa0064 0.11 +0.8 34,320 - SMa0064 0.11 -0.9 34,320 - SMa0064 0.11 -0.2 34,401 - SMa0064 0.18 +1.5 34,401 - SMa0064 0.18 -0.0 34,401 - SMa0064 0.18 -0.4 34,542 - SMa0064 0.29 +0.0 34,542 - SMa0064 0.29 -0.2 34,542 - SMa0064 0.29 +0.5 34,542 - SMa0064 0.29 +0.3 34,542 - SMa0064 0.29 +0.7 34,542 - SMa0064 0.29 +0.5 34,565 + SMa0064 0.31 -1.0 34,565 + SMa0064 0.31 -2.5 34,565 + SMa0064 0.31 -1.5 34,565 + SMa0064 0.31 +0.4 34,565 + SMa0064 0.31 -1.1 34,565 + SMa0064 0.31 -1.1 34,565 + SMa0064 0.31 -0.0 34,565 + SMa0064 0.31 -0.6 34,565 + SMa0064 0.31 -0.2 34,566 - SMa0064 0.31 -1.8 34,566 - SMa0064 0.31 +2.3 34,567 + SMa0064 0.31 -0.5 34,628 + SMa0064 0.36 -2.4 34,629 - SMa0064 0.36 +0.1 34,629 - SMa0064 0.36 -0.1 34,754 - SMa0064 0.47 -0.2 34,754 - SMa0064 0.47 +1.0 34,899 - SMa0064 0.59 -1.6 35,055 + SMa0064 0.72 -0.4 35,056 - SMa0064 0.72 +0.2 35,234 + SMa0064 0.87 -2.5 35,237 + SMa0064 0.87 -0.2 35,237 + SMa0064 0.87 +0.9 35,237 + SMa0064 0.87 -0.2 35,238 - SMa0064 0.87 -0.3 35,238 - SMa0064 0.87 +0.4 35,250 - SMa0064 0.88 -0.3 35,261 - SMa0064 0.89 -0.9 35,261 - SMa0064 0.89 -0.2 35,597 + SMa0065 0.20 -0.9 35,683 + SMa0065 0.33 +0.4 35,683 + SMa0065 0.33 -0.5 35,683 + SMa0065 0.33 -0.1 35,683 + SMa0065 0.33 -0.4 35,684 - SMa0065 0.33 +0.1 35,684 - SMa0065 0.33 +0.7 35,684 - SMa0065 0.33 +0.2 35,684 - SMa0065 0.33 -0.2 35,684 - SMa0065 0.33 +0.0 36,020 + SMa0065 0.82 -0.6 36,021 - SMa0065 0.82 +0.7 36,021 - SMa0065 0.82 -0.1 36,161 + +1.6 36,162 - -1.8 36,185 - -0.5 36,210 - -2.1
Or see this region's nucleotide sequence