Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21578 and SM_b21579 are separated by 59 nucleotides SM_b21579 and SM_b21580 are separated by 46 nucleotides SM_b21580 and SM_b21581 are separated by 264 nucleotides
SM_b21578: SM_b21578 - copper-transporting P-type ATPase, at 1,116,959 to 1,119,442
_b21578
SM_b21579: SM_b21579 - MerR family transcriptional regulator, at 1,119,502 to 1,119,945
_b21579
SM_b21580: SM_b21580 - hypothetical protein, at 1,119,992 to 1,120,438
_b21580
SM_b21581: SM_b21581 - glycosyltransferase, at 1,120,703 to 1,121,794
_b21581
Position (kb) 1119
1120
1121 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1119.291 kb on - strand at 1119.292 kb on + strand at 1119.292 kb on + strand at 1119.293 kb on - strand at 1119.559 kb on + strand, within SM_b21579 at 1119.559 kb on + strand, within SM_b21579 at 1119.559 kb on + strand, within SM_b21579 at 1119.560 kb on - strand, within SM_b21579 at 1119.577 kb on - strand, within SM_b21579 at 1119.607 kb on + strand, within SM_b21579 at 1119.637 kb on - strand, within SM_b21579 at 1119.785 kb on + strand, within SM_b21579 at 1119.944 kb on - strand at 1119.944 kb on - strand at 1119.984 kb on + strand at 1119.985 kb on - strand at 1119.985 kb on - strand at 1120.045 kb on - strand at 1120.120 kb on + strand, within SM_b21580 at 1120.291 kb on + strand, within SM_b21580 at 1120.292 kb on - strand, within SM_b21580 at 1120.421 kb on + strand at 1120.422 kb on - strand at 1120.422 kb on - strand at 1120.425 kb on + strand at 1120.425 kb on + strand at 1120.425 kb on + strand at 1120.425 kb on + strand at 1120.426 kb on - strand at 1120.426 kb on - strand at 1120.467 kb on + strand at 1120.754 kb on + strand at 1120.755 kb on - strand at 1120.787 kb on - strand at 1120.800 kb on + strand at 1120.847 kb on - strand, within SM_b21581 at 1120.847 kb on - strand at 1120.980 kb on + strand, within SM_b21581 at 1120.981 kb on - strand, within SM_b21581 at 1121.047 kb on + strand, within SM_b21581 at 1121.047 kb on + strand, within SM_b21581 at 1121.047 kb on + strand, within SM_b21581 at 1121.082 kb on - strand, within SM_b21581 at 1121.082 kb on - strand, within SM_b21581 at 1121.222 kb on + strand, within SM_b21581 at 1121.223 kb on - strand, within SM_b21581 at 1121.223 kb on - strand, within SM_b21581 at 1121.223 kb on - strand, within SM_b21581 at 1121.223 kb on - strand, within SM_b21581 at 1121.223 kb on - strand, within SM_b21581 at 1121.393 kb on + strand, within SM_b21581 at 1121.393 kb on + strand, within SM_b21581 at 1121.393 kb on + strand, within SM_b21581 at 1121.394 kb on - strand, within SM_b21581 at 1121.394 kb on - strand, within SM_b21581 at 1121.407 kb on - strand, within SM_b21581
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,119,291 - +1.0 1,119,292 + +0.3 1,119,292 + +3.5 1,119,293 - -0.2 1,119,559 + SM_b21579 0.13 -1.8 1,119,559 + SM_b21579 0.13 -0.0 1,119,559 + SM_b21579 0.13 +0.5 1,119,560 - SM_b21579 0.13 -1.3 1,119,577 - SM_b21579 0.17 +1.0 1,119,607 + SM_b21579 0.24 -0.2 1,119,637 - SM_b21579 0.30 -0.4 1,119,785 + SM_b21579 0.64 -0.2 1,119,944 - -0.9 1,119,944 - +0.7 1,119,984 + -0.3 1,119,985 - -0.4 1,119,985 - -0.8 1,120,045 - -0.1 1,120,120 + SM_b21580 0.29 -2.8 1,120,291 + SM_b21580 0.67 +0.9 1,120,292 - SM_b21580 0.67 -0.2 1,120,421 + -0.6 1,120,422 - +0.3 1,120,422 - -0.7 1,120,425 + -0.3 1,120,425 + +0.2 1,120,425 + +3.5 1,120,425 + -0.3 1,120,426 - +1.1 1,120,426 - -0.2 1,120,467 + -0.3 1,120,754 + +0.6 1,120,755 - +0.6 1,120,787 - +0.0 1,120,800 + +0.2 1,120,847 - SM_b21581 0.13 -0.9 1,120,847 - +0.5 1,120,980 + SM_b21581 0.25 -0.5 1,120,981 - SM_b21581 0.25 +0.0 1,121,047 + SM_b21581 0.32 +0.9 1,121,047 + SM_b21581 0.32 +0.1 1,121,047 + SM_b21581 0.32 +0.5 1,121,082 - SM_b21581 0.35 +1.6 1,121,082 - SM_b21581 0.35 +0.2 1,121,222 + SM_b21581 0.48 -2.1 1,121,223 - SM_b21581 0.48 -0.3 1,121,223 - SM_b21581 0.48 +0.5 1,121,223 - SM_b21581 0.48 +0.0 1,121,223 - SM_b21581 0.48 -0.5 1,121,223 - SM_b21581 0.48 +0.4 1,121,393 + SM_b21581 0.63 +1.0 1,121,393 + SM_b21581 0.63 -1.5 1,121,393 + SM_b21581 0.63 +0.1 1,121,394 - SM_b21581 0.63 -0.3 1,121,394 - SM_b21581 0.63 +0.2 1,121,407 - SM_b21581 0.64 +0.1
Or see this region's nucleotide sequence