Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21560 and SM_b21561 are separated by 4 nucleotides SM_b21561 and SM_b21562 are separated by 36 nucleotides SM_b21562 and SM_b21563 are separated by 130 nucleotides
SM_b21560: SM_b21560 - two component sensor histidine kinase, at 1,100,294 to 1,101,556
_b21560
SM_b21561: SM_b21561 - two component response regulator protein, at 1,101,561 to 1,102,259
_b21561
SM_b21562: SM_b21562 - hypothetical protein, at 1,102,296 to 1,102,847
_b21562
SM_b21563: SM_b21563 - transcriptional regulator, at 1,102,978 to 1,103,343
_b21563
Position (kb)
1101
1102
1103 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1100.675 kb on + strand, within SM_b21560 at 1100.675 kb on + strand, within SM_b21560 at 1101.103 kb on - strand, within SM_b21560 at 1101.324 kb on + strand, within SM_b21560 at 1101.325 kb on - strand, within SM_b21560 at 1101.325 kb on - strand, within SM_b21560 at 1101.325 kb on - strand, within SM_b21560 at 1101.562 kb on + strand at 1101.569 kb on + strand at 1101.581 kb on - strand at 1101.614 kb on + strand at 1101.806 kb on + strand, within SM_b21561 at 1101.806 kb on + strand, within SM_b21561 at 1101.807 kb on - strand, within SM_b21561 at 1101.807 kb on - strand, within SM_b21561 at 1101.964 kb on + strand, within SM_b21561 at 1101.965 kb on - strand, within SM_b21561 at 1102.170 kb on - strand, within SM_b21561 at 1102.181 kb on - strand, within SM_b21561 at 1102.199 kb on - strand at 1102.293 kb on + strand at 1102.298 kb on - strand at 1102.631 kb on + strand, within SM_b21562 at 1102.632 kb on - strand, within SM_b21562 at 1102.649 kb on + strand, within SM_b21562 at 1102.649 kb on + strand, within SM_b21562 at 1102.650 kb on - strand, within SM_b21562 at 1102.650 kb on - strand, within SM_b21562 at 1102.930 kb on - strand at 1102.939 kb on + strand at 1102.955 kb on + strand at 1102.979 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,100,675 + SM_b21560 0.30 -0.6 1,100,675 + SM_b21560 0.30 -0.8 1,101,103 - SM_b21560 0.64 -0.4 1,101,324 + SM_b21560 0.82 +0.2 1,101,325 - SM_b21560 0.82 +0.0 1,101,325 - SM_b21560 0.82 -0.4 1,101,325 - SM_b21560 0.82 -0.9 1,101,562 + +1.8 1,101,569 + +1.0 1,101,581 - -0.0 1,101,614 + -0.9 1,101,806 + SM_b21561 0.35 +0.7 1,101,806 + SM_b21561 0.35 -0.6 1,101,807 - SM_b21561 0.35 +1.3 1,101,807 - SM_b21561 0.35 +0.5 1,101,964 + SM_b21561 0.58 +0.7 1,101,965 - SM_b21561 0.58 -1.4 1,102,170 - SM_b21561 0.87 +1.6 1,102,181 - SM_b21561 0.89 -1.4 1,102,199 - -0.4 1,102,293 + -0.8 1,102,298 - -0.2 1,102,631 + SM_b21562 0.61 +1.1 1,102,632 - SM_b21562 0.61 -0.9 1,102,649 + SM_b21562 0.64 -0.3 1,102,649 + SM_b21562 0.64 +0.0 1,102,650 - SM_b21562 0.64 -1.9 1,102,650 - SM_b21562 0.64 +0.2 1,102,930 - +0.1 1,102,939 + -2.0 1,102,955 + -1.9 1,102,979 + +0.2
Or see this region's nucleotide sequence