Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21503 and SM_b21504 are separated by 10 nucleotides SM_b21504 and SM_b21505 overlap by 8 nucleotides SM_b21505 and SM_b21506 are separated by 12 nucleotides
SM_b21503: SM_b21503 - glycosyltransferase, at 1,427,874 to 1,429,217
_b21503
SM_b21504: SM_b21504 - hypothetical protein, at 1,429,228 to 1,429,983
_b21504
SM_b21505: SM_b21505 - membrane protein, Wzy-like polysaccharide polymerase ExoQ, at 1,429,976 to 1,431,307
_b21505
SM_b21506: SM_b21506 - cell surface polysaccharides export protein, at 1,431,320 to 1,432,936
_b21506
Position (kb)
1429
1430
1431
1432 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1429.034 kb on - strand, within SM_b21503 at 1429.034 kb on - strand, within SM_b21503 at 1429.139 kb on + strand at 1429.139 kb on + strand at 1429.139 kb on + strand at 1429.140 kb on - strand at 1429.183 kb on + strand at 1429.183 kb on + strand at 1429.183 kb on + strand at 1429.184 kb on - strand at 1429.229 kb on + strand at 1429.292 kb on + strand at 1429.293 kb on - strand at 1429.331 kb on + strand, within SM_b21504 at 1429.332 kb on - strand, within SM_b21504 at 1429.332 kb on - strand, within SM_b21504 at 1429.566 kb on - strand, within SM_b21504 at 1429.784 kb on - strand, within SM_b21504 at 1429.784 kb on - strand, within SM_b21504 at 1429.784 kb on - strand, within SM_b21504 at 1429.785 kb on + strand, within SM_b21504 at 1429.787 kb on + strand, within SM_b21504 at 1429.787 kb on + strand, within SM_b21504 at 1429.787 kb on + strand, within SM_b21504 at 1429.787 kb on + strand, within SM_b21504 at 1429.787 kb on + strand, within SM_b21504 at 1429.788 kb on - strand, within SM_b21504 at 1429.788 kb on - strand, within SM_b21504 at 1429.788 kb on - strand, within SM_b21504 at 1429.788 kb on - strand, within SM_b21504 at 1429.788 kb on - strand, within SM_b21504 at 1429.788 kb on - strand, within SM_b21504 at 1429.808 kb on + strand, within SM_b21504 at 1429.808 kb on + strand, within SM_b21504 at 1429.809 kb on - strand, within SM_b21504 at 1429.809 kb on - strand, within SM_b21504 at 1429.809 kb on - strand, within SM_b21504 at 1429.988 kb on + strand at 1430.055 kb on + strand at 1430.056 kb on - strand at 1430.056 kb on - strand at 1430.137 kb on - strand, within SM_b21505 at 1430.145 kb on - strand, within SM_b21505 at 1430.150 kb on + strand, within SM_b21505 at 1430.151 kb on - strand, within SM_b21505 at 1430.341 kb on - strand, within SM_b21505 at 1430.380 kb on - strand, within SM_b21505 at 1430.380 kb on - strand, within SM_b21505 at 1430.706 kb on + strand, within SM_b21505 at 1430.707 kb on - strand, within SM_b21505 at 1430.707 kb on - strand, within SM_b21505 at 1430.850 kb on + strand, within SM_b21505 at 1430.851 kb on - strand, within SM_b21505 at 1430.853 kb on + strand, within SM_b21505 at 1430.854 kb on - strand, within SM_b21505 at 1430.931 kb on + strand, within SM_b21505 at 1430.932 kb on - strand, within SM_b21505 at 1430.932 kb on - strand, within SM_b21505 at 1431.434 kb on - strand at 1431.550 kb on - strand, within SM_b21506 at 1431.793 kb on - strand, within SM_b21506 at 1431.793 kb on - strand, within SM_b21506 at 1431.796 kb on + strand, within SM_b21506 at 1431.796 kb on + strand, within SM_b21506 at 1431.832 kb on + strand, within SM_b21506 at 1431.834 kb on + strand, within SM_b21506 at 1431.834 kb on + strand, within SM_b21506 at 1431.835 kb on - strand, within SM_b21506 at 1431.835 kb on - strand, within SM_b21506 at 1432.295 kb on + strand, within SM_b21506 at 1432.295 kb on + strand, within SM_b21506
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,429,034 - SM_b21503 0.86 -0.9 1,429,034 - SM_b21503 0.86 +0.9 1,429,139 + -0.4 1,429,139 + +0.9 1,429,139 + -0.3 1,429,140 - -0.8 1,429,183 + +0.7 1,429,183 + +1.5 1,429,183 + +0.8 1,429,184 - -0.6 1,429,229 + -0.9 1,429,292 + -0.1 1,429,293 - -1.1 1,429,331 + SM_b21504 0.14 -1.1 1,429,332 - SM_b21504 0.14 -2.5 1,429,332 - SM_b21504 0.14 -2.1 1,429,566 - SM_b21504 0.45 -0.4 1,429,784 - SM_b21504 0.74 -1.4 1,429,784 - SM_b21504 0.74 -0.7 1,429,784 - SM_b21504 0.74 +0.8 1,429,785 + SM_b21504 0.74 +0.1 1,429,787 + SM_b21504 0.74 -0.4 1,429,787 + SM_b21504 0.74 -1.1 1,429,787 + SM_b21504 0.74 -0.1 1,429,787 + SM_b21504 0.74 +2.8 1,429,787 + SM_b21504 0.74 -2.4 1,429,788 - SM_b21504 0.74 -3.4 1,429,788 - SM_b21504 0.74 -0.3 1,429,788 - SM_b21504 0.74 -0.1 1,429,788 - SM_b21504 0.74 -1.2 1,429,788 - SM_b21504 0.74 +0.4 1,429,788 - SM_b21504 0.74 -0.6 1,429,808 + SM_b21504 0.77 +0.5 1,429,808 + SM_b21504 0.77 +0.7 1,429,809 - SM_b21504 0.77 -1.1 1,429,809 - SM_b21504 0.77 -0.7 1,429,809 - SM_b21504 0.77 -1.6 1,429,988 + -1.7 1,430,055 + +0.1 1,430,056 - -1.3 1,430,056 - -0.3 1,430,137 - SM_b21505 0.12 -1.8 1,430,145 - SM_b21505 0.13 +1.4 1,430,150 + SM_b21505 0.13 -1.0 1,430,151 - SM_b21505 0.13 -0.2 1,430,341 - SM_b21505 0.27 +0.4 1,430,380 - SM_b21505 0.30 -0.2 1,430,380 - SM_b21505 0.30 -0.1 1,430,706 + SM_b21505 0.55 -1.2 1,430,707 - SM_b21505 0.55 -0.8 1,430,707 - SM_b21505 0.55 -0.8 1,430,850 + SM_b21505 0.66 -2.1 1,430,851 - SM_b21505 0.66 -0.8 1,430,853 + SM_b21505 0.66 -0.0 1,430,854 - SM_b21505 0.66 +0.9 1,430,931 + SM_b21505 0.72 +0.4 1,430,932 - SM_b21505 0.72 +0.0 1,430,932 - SM_b21505 0.72 +0.7 1,431,434 - +0.4 1,431,550 - SM_b21506 0.14 +0.2 1,431,793 - SM_b21506 0.29 -1.1 1,431,793 - SM_b21506 0.29 -0.1 1,431,796 + SM_b21506 0.29 -2.8 1,431,796 + SM_b21506 0.29 -0.3 1,431,832 + SM_b21506 0.32 -0.1 1,431,834 + SM_b21506 0.32 +0.5 1,431,834 + SM_b21506 0.32 -0.2 1,431,835 - SM_b21506 0.32 -0.8 1,431,835 - SM_b21506 0.32 +0.0 1,432,295 + SM_b21506 0.60 +0.4 1,432,295 + SM_b21506 0.60 +0.7
Or see this region's nucleotide sequence