Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21435 and SM_b21436 are separated by 36 nucleotides SM_b21436 and SM_b21437 overlap by 4 nucleotides SM_b21437 and SM_b21438 are separated by 83 nucleotides
SM_b21435: SM_b21435 - allantoate amidohydrolase, at 1,365,106 to 1,366,350
_b21435
SM_b21436: SM_b21436 - C4-dicarboxylate transport system, permease large protein transmembrane, at 1,366,387 to 1,367,667
_b21436
SM_b21437: SM_b21437 - C4-dicarboxylate transport system, permease small protein transmembrane, at 1,367,664 to 1,368,140
_b21437
SM_b21438: SM_b21438 - C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide, at 1,368,224 to 1,369,222
_b21438
Position (kb) 1366
1367
1368 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1365.663 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.664 kb on - strand, within SM_b21435 at 1365.701 kb on + strand, within SM_b21435 at 1365.701 kb on + strand, within SM_b21435 at 1365.903 kb on - strand, within SM_b21435 at 1366.020 kb on + strand, within SM_b21435 at 1366.478 kb on + strand at 1366.479 kb on - strand at 1366.551 kb on + strand, within SM_b21436 at 1366.552 kb on - strand, within SM_b21436 at 1366.552 kb on - strand, within SM_b21436 at 1366.896 kb on - strand, within SM_b21436 at 1366.896 kb on - strand, within SM_b21436 at 1366.896 kb on - strand, within SM_b21436 at 1366.922 kb on + strand, within SM_b21436 at 1366.922 kb on + strand, within SM_b21436 at 1367.200 kb on + strand, within SM_b21436 at 1367.200 kb on + strand, within SM_b21436 at 1367.201 kb on - strand, within SM_b21436 at 1367.201 kb on - strand, within SM_b21436 at 1367.551 kb on + strand at 1367.552 kb on - strand at 1367.570 kb on + strand at 1367.731 kb on + strand, within SM_b21437 at 1367.790 kb on + strand, within SM_b21437 at 1367.790 kb on + strand, within SM_b21437 at 1367.791 kb on - strand, within SM_b21437 at 1367.850 kb on + strand, within SM_b21437 at 1368.017 kb on - strand, within SM_b21437 at 1368.087 kb on + strand, within SM_b21437 at 1368.096 kb on + strand at 1368.097 kb on - strand at 1368.097 kb on - strand at 1368.097 kb on - strand at 1368.097 kb on - strand at 1368.225 kb on + strand at 1368.225 kb on + strand at 1368.235 kb on - strand at 1368.529 kb on - strand, within SM_b21438 at 1368.529 kb on - strand, within SM_b21438 at 1368.543 kb on + strand, within SM_b21438 at 1368.543 kb on + strand, within SM_b21438 at 1368.616 kb on - strand, within SM_b21438 at 1368.617 kb on + strand, within SM_b21438 at 1368.617 kb on + strand, within SM_b21438 at 1368.618 kb on - strand, within SM_b21438 at 1368.618 kb on - strand, within SM_b21438
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,365,663 + SM_b21435 0.45 -0.1 1,365,663 + SM_b21435 0.45 -0.0 1,365,663 + SM_b21435 0.45 +0.1 1,365,663 + SM_b21435 0.45 +0.7 1,365,664 - SM_b21435 0.45 -0.8 1,365,701 + SM_b21435 0.48 -1.0 1,365,701 + SM_b21435 0.48 -0.5 1,365,903 - SM_b21435 0.64 +0.7 1,366,020 + SM_b21435 0.73 +0.0 1,366,478 + -0.1 1,366,479 - -0.2 1,366,551 + SM_b21436 0.13 +0.0 1,366,552 - SM_b21436 0.13 -0.0 1,366,552 - SM_b21436 0.13 -2.0 1,366,896 - SM_b21436 0.40 +0.2 1,366,896 - SM_b21436 0.40 -1.6 1,366,896 - SM_b21436 0.40 +0.6 1,366,922 + SM_b21436 0.42 +1.1 1,366,922 + SM_b21436 0.42 -0.0 1,367,200 + SM_b21436 0.63 -0.3 1,367,200 + SM_b21436 0.63 +0.4 1,367,201 - SM_b21436 0.64 +0.9 1,367,201 - SM_b21436 0.64 +0.6 1,367,551 + +0.9 1,367,552 - -2.1 1,367,570 + -0.1 1,367,731 + SM_b21437 0.14 -0.8 1,367,790 + SM_b21437 0.26 -1.0 1,367,790 + SM_b21437 0.26 -1.6 1,367,791 - SM_b21437 0.27 +0.7 1,367,850 + SM_b21437 0.39 -0.8 1,368,017 - SM_b21437 0.74 -0.1 1,368,087 + SM_b21437 0.89 -0.1 1,368,096 + -0.0 1,368,097 - -0.1 1,368,097 - -0.1 1,368,097 - +0.6 1,368,097 - +1.0 1,368,225 + +0.1 1,368,225 + -0.2 1,368,235 - -0.8 1,368,529 - SM_b21438 0.31 -0.4 1,368,529 - SM_b21438 0.31 +3.3 1,368,543 + SM_b21438 0.32 +0.1 1,368,543 + SM_b21438 0.32 +1.5 1,368,616 - SM_b21438 0.39 +1.3 1,368,617 + SM_b21438 0.39 +3.1 1,368,617 + SM_b21438 0.39 -0.2 1,368,618 - SM_b21438 0.39 +0.3 1,368,618 - SM_b21438 0.39 +0.4
Or see this region's nucleotide sequence