Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21685 and SM_b21434 are separated by 9 nucleotides SM_b21434 and SM_b21435 are separated by 55 nucleotides SM_b21435 and SM_b21436 are separated by 36 nucleotides
SM_b21685: SM_b21685 - hypothetical protein, at 1,363,965 to 1,364,120
_b21685
SM_b21434: SM_b21434 - LysR family transcriptional regulator, at 1,364,130 to 1,365,050
_b21434
SM_b21435: SM_b21435 - allantoate amidohydrolase, at 1,365,106 to 1,366,350
_b21435
SM_b21436: SM_b21436 - C4-dicarboxylate transport system, permease large protein transmembrane, at 1,366,387 to 1,367,667
_b21436
Position (kb)
1365
1366
1367 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1364.119 kb on - strand at 1364.335 kb on - strand, within SM_b21434 at 1364.335 kb on - strand, within SM_b21434 at 1364.373 kb on - strand, within SM_b21434 at 1364.478 kb on + strand, within SM_b21434 at 1364.501 kb on - strand, within SM_b21434 at 1364.575 kb on + strand, within SM_b21434 at 1364.575 kb on + strand, within SM_b21434 at 1364.575 kb on + strand, within SM_b21434 at 1364.575 kb on + strand, within SM_b21434 at 1364.576 kb on - strand, within SM_b21434 at 1364.576 kb on - strand, within SM_b21434 at 1364.576 kb on - strand, within SM_b21434 at 1364.576 kb on - strand, within SM_b21434 at 1364.576 kb on - strand, within SM_b21434 at 1364.576 kb on - strand, within SM_b21434 at 1364.644 kb on - strand, within SM_b21434 at 1364.644 kb on - strand, within SM_b21434 at 1364.644 kb on - strand, within SM_b21434 at 1364.676 kb on - strand, within SM_b21434 at 1364.827 kb on + strand, within SM_b21434 at 1364.827 kb on + strand, within SM_b21434 at 1364.827 kb on + strand, within SM_b21434 at 1364.828 kb on - strand, within SM_b21434 at 1365.257 kb on + strand, within SM_b21435 at 1365.257 kb on + strand, within SM_b21435 at 1365.299 kb on + strand, within SM_b21435 at 1365.382 kb on + strand, within SM_b21435 at 1365.382 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.663 kb on + strand, within SM_b21435 at 1365.664 kb on - strand, within SM_b21435 at 1365.701 kb on + strand, within SM_b21435 at 1365.701 kb on + strand, within SM_b21435 at 1365.903 kb on - strand, within SM_b21435 at 1366.020 kb on + strand, within SM_b21435 at 1366.478 kb on + strand at 1366.479 kb on - strand at 1366.551 kb on + strand, within SM_b21436 at 1366.552 kb on - strand, within SM_b21436 at 1366.552 kb on - strand, within SM_b21436 at 1366.896 kb on - strand, within SM_b21436 at 1366.896 kb on - strand, within SM_b21436 at 1366.896 kb on - strand, within SM_b21436 at 1366.922 kb on + strand, within SM_b21436 at 1366.922 kb on + strand, within SM_b21436 at 1367.200 kb on + strand, within SM_b21436 at 1367.200 kb on + strand, within SM_b21436 at 1367.201 kb on - strand, within SM_b21436 at 1367.201 kb on - strand, within SM_b21436
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,364,119 - +0.5 1,364,335 - SM_b21434 0.22 -0.5 1,364,335 - SM_b21434 0.22 -0.4 1,364,373 - SM_b21434 0.26 -0.6 1,364,478 + SM_b21434 0.38 -0.4 1,364,501 - SM_b21434 0.40 +0.9 1,364,575 + SM_b21434 0.48 -0.5 1,364,575 + SM_b21434 0.48 +0.7 1,364,575 + SM_b21434 0.48 -0.5 1,364,575 + SM_b21434 0.48 +1.6 1,364,576 - SM_b21434 0.48 -0.9 1,364,576 - SM_b21434 0.48 -0.5 1,364,576 - SM_b21434 0.48 +0.1 1,364,576 - SM_b21434 0.48 +0.6 1,364,576 - SM_b21434 0.48 -0.1 1,364,576 - SM_b21434 0.48 -0.2 1,364,644 - SM_b21434 0.56 +1.2 1,364,644 - SM_b21434 0.56 -2.8 1,364,644 - SM_b21434 0.56 -0.1 1,364,676 - SM_b21434 0.59 +0.5 1,364,827 + SM_b21434 0.76 -0.9 1,364,827 + SM_b21434 0.76 -0.5 1,364,827 + SM_b21434 0.76 -0.9 1,364,828 - SM_b21434 0.76 +0.1 1,365,257 + SM_b21435 0.12 -0.4 1,365,257 + SM_b21435 0.12 -0.8 1,365,299 + SM_b21435 0.16 -0.8 1,365,382 + SM_b21435 0.22 -0.4 1,365,382 + SM_b21435 0.22 +0.5 1,365,663 + SM_b21435 0.45 -0.1 1,365,663 + SM_b21435 0.45 -0.0 1,365,663 + SM_b21435 0.45 +0.1 1,365,663 + SM_b21435 0.45 +0.7 1,365,664 - SM_b21435 0.45 -0.8 1,365,701 + SM_b21435 0.48 -1.0 1,365,701 + SM_b21435 0.48 -0.5 1,365,903 - SM_b21435 0.64 +0.7 1,366,020 + SM_b21435 0.73 +0.0 1,366,478 + -0.1 1,366,479 - -0.2 1,366,551 + SM_b21436 0.13 +0.0 1,366,552 - SM_b21436 0.13 -0.0 1,366,552 - SM_b21436 0.13 -2.0 1,366,896 - SM_b21436 0.40 +0.2 1,366,896 - SM_b21436 0.40 -1.6 1,366,896 - SM_b21436 0.40 +0.6 1,366,922 + SM_b21436 0.42 +1.1 1,366,922 + SM_b21436 0.42 -0.0 1,367,200 + SM_b21436 0.63 -0.3 1,367,200 + SM_b21436 0.63 +0.4 1,367,201 - SM_b21436 0.64 +0.9 1,367,201 - SM_b21436 0.64 +0.6
Or see this region's nucleotide sequence