Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21342 and SM_b21343 are separated by 6 nucleotides SM_b21343 and SM_b21344 are separated by 1 nucleotides
SM_b21342: SM_b21342 - sugar uptake ABC transporter permease, at 1,007,763 to 1,008,761
_b21342
SM_b21343: SM_b21343 - sugar uptake ABC transporter permease, at 1,008,768 to 1,009,772
_b21343
SM_b21344: SM_b21344 - sugar uptake ABC transporter ATP-binding protein, at 1,009,774 to 1,011,267
_b21344
Position (kb)
1008
1009
1010 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1007.857 kb on + strand at 1007.978 kb on + strand, within SM_b21342 at 1007.991 kb on + strand, within SM_b21342 at 1007.991 kb on + strand, within SM_b21342 at 1007.991 kb on + strand, within SM_b21342 at 1007.992 kb on - strand, within SM_b21342 at 1008.103 kb on + strand, within SM_b21342 at 1008.227 kb on - strand, within SM_b21342 at 1008.304 kb on + strand, within SM_b21342 at 1008.305 kb on - strand, within SM_b21342 at 1008.353 kb on - strand, within SM_b21342 at 1008.481 kb on + strand, within SM_b21342 at 1008.604 kb on + strand, within SM_b21342 at 1008.605 kb on - strand, within SM_b21342 at 1008.629 kb on - strand, within SM_b21342 at 1008.872 kb on - strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.073 kb on - strand, within SM_b21343 at 1009.101 kb on + strand, within SM_b21343 at 1009.697 kb on - strand at 1009.775 kb on + strand at 1009.776 kb on - strand at 1009.776 kb on - strand at 1010.089 kb on - strand, within SM_b21344 at 1010.089 kb on - strand, within SM_b21344 at 1010.089 kb on - strand, within SM_b21344 at 1010.132 kb on + strand, within SM_b21344 at 1010.133 kb on - strand, within SM_b21344 at 1010.133 kb on - strand, within SM_b21344 at 1010.241 kb on + strand, within SM_b21344 at 1010.331 kb on - strand, within SM_b21344 at 1010.568 kb on + strand, within SM_b21344 at 1010.569 kb on - strand, within SM_b21344 at 1010.725 kb on + strand, within SM_b21344 at 1010.726 kb on - strand, within SM_b21344 at 1010.726 kb on - strand, within SM_b21344
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,007,857 + -0.3 1,007,978 + SM_b21342 0.22 +0.5 1,007,991 + SM_b21342 0.23 +0.3 1,007,991 + SM_b21342 0.23 +0.2 1,007,991 + SM_b21342 0.23 -0.3 1,007,992 - SM_b21342 0.23 +0.3 1,008,103 + SM_b21342 0.34 -0.0 1,008,227 - SM_b21342 0.46 -1.3 1,008,304 + SM_b21342 0.54 -0.1 1,008,305 - SM_b21342 0.54 +0.9 1,008,353 - SM_b21342 0.59 -2.2 1,008,481 + SM_b21342 0.72 -0.4 1,008,604 + SM_b21342 0.84 +0.9 1,008,605 - SM_b21342 0.84 +1.7 1,008,629 - SM_b21342 0.87 -1.1 1,008,872 - SM_b21343 0.10 -0.7 1,009,072 + SM_b21343 0.30 -2.5 1,009,072 + SM_b21343 0.30 -0.4 1,009,072 + SM_b21343 0.30 +2.8 1,009,073 - SM_b21343 0.30 -0.1 1,009,101 + SM_b21343 0.33 -0.8 1,009,697 - +1.9 1,009,775 + +0.5 1,009,776 - -1.7 1,009,776 - +0.2 1,010,089 - SM_b21344 0.21 -0.3 1,010,089 - SM_b21344 0.21 +2.9 1,010,089 - SM_b21344 0.21 -0.1 1,010,132 + SM_b21344 0.24 -2.8 1,010,133 - SM_b21344 0.24 +0.4 1,010,133 - SM_b21344 0.24 +0.4 1,010,241 + SM_b21344 0.31 -1.9 1,010,331 - SM_b21344 0.37 +0.4 1,010,568 + SM_b21344 0.53 -0.1 1,010,569 - SM_b21344 0.53 -1.0 1,010,725 + SM_b21344 0.64 +1.7 1,010,726 - SM_b21344 0.64 -0.0 1,010,726 - SM_b21344 0.64 +1.9
Or see this region's nucleotide sequence