Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21273 and SM_b21274 are separated by 16 nucleotides SM_b21274 and SM_b21275 overlap by 4 nucleotides
SM_b21273: SM_b21273 - spermidineputrescine ABC transporter substrate-binding protein precursor, at 847,044 to 848,066
_b21273
SM_b21274: SM_b21274 - spermidine/putrescine ABC transporter permease, at 848,083 to 848,982
_b21274
SM_b21275: SM_b21275 - spermidineputrescine ABC transporter permease, at 848,979 to 849,758
_b21275
Position (kb) 848
849
850 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 848.120 kb on - strand at 848.120 kb on - strand at 848.151 kb on - strand at 848.468 kb on + strand, within SM_b21274 at 848.488 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.800 kb on + strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.801 kb on - strand, within SM_b21274 at 848.802 kb on + strand, within SM_b21274 at 848.802 kb on + strand, within SM_b21274 at 849.229 kb on - strand, within SM_b21275 at 849.328 kb on + strand, within SM_b21275 at 849.328 kb on + strand, within SM_b21275 at 849.329 kb on - strand, within SM_b21275 at 849.329 kb on - strand, within SM_b21275 at 849.334 kb on - strand, within SM_b21275 at 849.334 kb on - strand, within SM_b21275 at 849.359 kb on + strand, within SM_b21275 at 849.359 kb on + strand, within SM_b21275 at 849.642 kb on + strand, within SM_b21275 at 849.643 kb on - strand, within SM_b21275 at 849.643 kb on - strand, within SM_b21275 at 849.657 kb on + strand, within SM_b21275 at 849.657 kb on + strand, within SM_b21275 at 849.657 kb on + strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.658 kb on - strand, within SM_b21275 at 849.750 kb on + strand at 849.796 kb on + strand at 849.936 kb on + strand at 849.937 kb on - strand at 849.960 kb on + strand at 849.961 kb on - strand at 850.009 kb on + strand at 850.010 kb on - strand at 850.423 kb on + strand at 850.423 kb on + strand at 850.423 kb on + strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.425 kb on + strand at 850.648 kb on + strand at 850.648 kb on + strand at 850.660 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 848,120 - -0.1 848,120 - +1.0 848,151 - +3.9 848,468 + SM_b21274 0.43 -0.7 848,488 + SM_b21274 0.45 +0.2 848,800 + SM_b21274 0.80 +1.4 848,800 + SM_b21274 0.80 +0.1 848,800 + SM_b21274 0.80 +0.2 848,800 + SM_b21274 0.80 +1.7 848,801 - SM_b21274 0.80 -1.7 848,801 - SM_b21274 0.80 +0.4 848,801 - SM_b21274 0.80 +0.0 848,801 - SM_b21274 0.80 +1.3 848,801 - SM_b21274 0.80 -0.4 848,801 - SM_b21274 0.80 -1.9 848,801 - SM_b21274 0.80 +1.2 848,801 - SM_b21274 0.80 -0.4 848,801 - SM_b21274 0.80 +0.4 848,801 - SM_b21274 0.80 -1.4 848,801 - SM_b21274 0.80 -1.7 848,802 + SM_b21274 0.80 +3.9 848,802 + SM_b21274 0.80 -0.5 849,229 - SM_b21275 0.32 -0.1 849,328 + SM_b21275 0.45 +1.9 849,328 + SM_b21275 0.45 +0.2 849,329 - SM_b21275 0.45 +0.6 849,329 - SM_b21275 0.45 -0.1 849,334 - SM_b21275 0.46 +0.9 849,334 - SM_b21275 0.46 +0.9 849,359 + SM_b21275 0.49 -0.5 849,359 + SM_b21275 0.49 -1.5 849,642 + SM_b21275 0.85 -1.7 849,643 - SM_b21275 0.85 -0.9 849,643 - SM_b21275 0.85 +0.8 849,657 + SM_b21275 0.87 +0.2 849,657 + SM_b21275 0.87 -0.8 849,657 + SM_b21275 0.87 +0.9 849,658 - SM_b21275 0.87 +0.0 849,658 - SM_b21275 0.87 +0.1 849,658 - SM_b21275 0.87 -0.1 849,658 - SM_b21275 0.87 -0.6 849,658 - SM_b21275 0.87 -0.9 849,750 + +0.0 849,796 + -1.9 849,936 + -3.3 849,937 - -0.1 849,960 + -4.1 849,961 - -0.2 850,009 + -0.5 850,010 - -0.4 850,423 + +2.2 850,423 + +1.9 850,423 + -0.4 850,424 - +0.0 850,424 - -0.3 850,424 - -0.4 850,424 - -0.7 850,425 + -0.2 850,648 + -0.5 850,648 + -0.6 850,660 - +0.1
Or see this region's nucleotide sequence