Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21109 and SM_b21110 are separated by 1 nucleotides SM_b21110 and SM_b21111 overlap by 4 nucleotides SM_b21111 and SM_b21112 are separated by 22 nucleotides
SM_b21109: SM_b21109 - L-fucose dehydrogenase (EC 1.1.1.122) <small>(from data)</small>, at 750,677 to 751,759
_b21109
SM_b21110: SM_b21110 - dehydratase involved in L-fucose catabolism <small>(from data)</small>, at 751,761 to 752,222
_b21110
SM_b21111: SM_b21111 - oxidoreductase, RED superfamily protein, at 752,219 to 752,953
_b21111
SM_b21112: SM_b21112 - L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase <small>(from data)</small>, at 752,976 to 753,821
_b21112
Position (kb) 751
752
753 Strain fitness (log2 ratio) -2
-1
0
1
2 at 750.794 kb on + strand, within SM_b21109 at 750.794 kb on + strand, within SM_b21109 at 750.795 kb on - strand, within SM_b21109 at 750.796 kb on + strand, within SM_b21109 at 750.797 kb on - strand, within SM_b21109 at 751.000 kb on - strand, within SM_b21109 at 751.142 kb on + strand, within SM_b21109 at 751.143 kb on - strand, within SM_b21109 at 751.143 kb on - strand, within SM_b21109 at 751.256 kb on + strand, within SM_b21109 at 751.256 kb on + strand, within SM_b21109 at 751.256 kb on + strand, within SM_b21109 at 751.257 kb on - strand, within SM_b21109 at 751.472 kb on + strand, within SM_b21109 at 751.473 kb on - strand, within SM_b21109 at 751.473 kb on - strand, within SM_b21109 at 751.473 kb on - strand, within SM_b21109 at 751.779 kb on + strand at 751.783 kb on - strand at 751.783 kb on - strand at 751.783 kb on - strand at 751.783 kb on - strand at 751.791 kb on + strand at 751.791 kb on + strand at 752.008 kb on - strand, within SM_b21110 at 752.008 kb on - strand, within SM_b21110 at 752.054 kb on + strand, within SM_b21110 at 752.055 kb on - strand, within SM_b21110 at 752.213 kb on + strand at 752.213 kb on + strand at 752.214 kb on - strand at 752.254 kb on - strand at 752.274 kb on + strand at 752.274 kb on + strand at 752.275 kb on - strand at 752.275 kb on - strand at 752.714 kb on + strand, within SM_b21111 at 752.714 kb on + strand, within SM_b21111 at 752.715 kb on - strand at 752.718 kb on + strand, within SM_b21111 at 752.718 kb on + strand, within SM_b21111 at 752.805 kb on - strand, within SM_b21111 at 752.805 kb on - strand, within SM_b21111 at 752.889 kb on - strand at 752.889 kb on - strand at 752.907 kb on - strand at 752.907 kb on - strand at 752.925 kb on - strand at 752.992 kb on - strand at 753.064 kb on + strand, within SM_b21112 at 753.213 kb on + strand, within SM_b21112 at 753.213 kb on + strand, within SM_b21112
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 750,794 + SM_b21109 0.11 +0.7 750,794 + SM_b21109 0.11 -1.4 750,795 - SM_b21109 0.11 -0.0 750,796 + SM_b21109 0.11 +0.2 750,797 - SM_b21109 0.11 +1.0 751,000 - SM_b21109 0.30 -0.1 751,142 + SM_b21109 0.43 +0.8 751,143 - SM_b21109 0.43 -0.7 751,143 - SM_b21109 0.43 +0.9 751,256 + SM_b21109 0.53 -2.7 751,256 + SM_b21109 0.53 -1.2 751,256 + SM_b21109 0.53 +0.1 751,257 - SM_b21109 0.54 -0.1 751,472 + SM_b21109 0.73 +0.0 751,473 - SM_b21109 0.73 +0.4 751,473 - SM_b21109 0.73 -0.7 751,473 - SM_b21109 0.73 -0.2 751,779 + -0.4 751,783 - +0.2 751,783 - +0.0 751,783 - +0.0 751,783 - -1.2 751,791 + -0.9 751,791 + +1.4 752,008 - SM_b21110 0.53 +0.7 752,008 - SM_b21110 0.53 +0.8 752,054 + SM_b21110 0.63 +0.3 752,055 - SM_b21110 0.64 -0.0 752,213 + +2.2 752,213 + -0.7 752,214 - +0.1 752,254 - +0.0 752,274 + +0.8 752,274 + +0.7 752,275 - +0.2 752,275 - +0.6 752,714 + SM_b21111 0.67 -0.6 752,714 + SM_b21111 0.67 +0.8 752,715 - +0.8 752,718 + SM_b21111 0.68 -0.8 752,718 + SM_b21111 0.68 +1.3 752,805 - SM_b21111 0.80 -0.2 752,805 - SM_b21111 0.80 +0.6 752,889 - -0.5 752,889 - -0.5 752,907 - +0.9 752,907 - -0.2 752,925 - +0.5 752,992 - +0.3 753,064 + SM_b21112 0.10 +0.1 753,213 + SM_b21112 0.28 +0.4 753,213 + SM_b21112 0.28 -0.7
Or see this region's nucleotide sequence