Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21053 and SM_b21054 are separated by 88 nucleotides SM_b21054 and SM_b21055 are separated by 232 nucleotides SM_b21055 and SM_b21056 are separated by 134 nucleotides
SM_b21053: SM_b21053 - membrane-anchored glycosyltransferase, at 686,566 to 687,816
_b21053
SM_b21054: SM_b21054 - hypothetical protein, at 687,905 to 688,522
_b21054
SM_b21055: SM_b21055 - hypothetical protein, at 688,755 to 689,339
_b21055
SM_b21056: SM_b21056 - esterase, at 689,474 to 691,801
_b21056
Position (kb) 687
688
689 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 686.912 kb on - strand, within SM_b21053 at 686.912 kb on - strand, within SM_b21053 at 686.934 kb on - strand, within SM_b21053 at 686.956 kb on - strand, within SM_b21053 at 687.062 kb on + strand, within SM_b21053 at 687.062 kb on + strand, within SM_b21053 at 687.062 kb on + strand, within SM_b21053 at 687.191 kb on + strand, within SM_b21053 at 687.212 kb on + strand, within SM_b21053 at 687.242 kb on + strand, within SM_b21053 at 687.242 kb on + strand, within SM_b21053 at 687.304 kb on + strand, within SM_b21053 at 687.377 kb on - strand, within SM_b21053 at 687.401 kb on - strand, within SM_b21053 at 687.496 kb on + strand, within SM_b21053 at 687.497 kb on - strand, within SM_b21053 at 687.497 kb on - strand, within SM_b21053 at 687.514 kb on - strand, within SM_b21053 at 687.607 kb on - strand, within SM_b21053 at 687.607 kb on - strand, within SM_b21053 at 687.683 kb on + strand, within SM_b21053 at 687.684 kb on - strand, within SM_b21053 at 687.786 kb on - strand at 687.797 kb on - strand at 687.824 kb on + strand at 687.824 kb on + strand at 687.824 kb on + strand at 687.825 kb on - strand at 687.831 kb on + strand at 687.831 kb on + strand at 687.831 kb on + strand at 687.832 kb on - strand at 687.832 kb on - strand at 687.832 kb on - strand at 687.832 kb on - strand at 687.947 kb on - strand at 687.947 kb on - strand at 687.947 kb on - strand at 687.949 kb on - strand at 687.949 kb on - strand at 687.961 kb on - strand at 688.015 kb on + strand, within SM_b21054 at 688.051 kb on - strand, within SM_b21054 at 688.190 kb on - strand, within SM_b21054 at 688.204 kb on - strand, within SM_b21054 at 688.204 kb on - strand, within SM_b21054 at 688.216 kb on + strand, within SM_b21054 at 688.217 kb on - strand, within SM_b21054 at 688.249 kb on + strand, within SM_b21054 at 688.250 kb on - strand, within SM_b21054 at 688.276 kb on + strand, within SM_b21054 at 688.286 kb on + strand, within SM_b21054 at 688.287 kb on - strand, within SM_b21054 at 688.302 kb on + strand, within SM_b21054 at 688.395 kb on + strand, within SM_b21054 at 688.406 kb on - strand, within SM_b21054 at 688.447 kb on + strand, within SM_b21054 at 688.518 kb on + strand at 688.518 kb on + strand at 688.519 kb on - strand at 688.519 kb on - strand at 688.519 kb on - strand at 688.519 kb on - strand at 688.545 kb on - strand at 688.565 kb on + strand at 688.566 kb on - strand at 688.566 kb on - strand at 688.613 kb on + strand at 688.614 kb on - strand at 688.641 kb on - strand at 688.641 kb on - strand at 688.680 kb on + strand at 688.718 kb on + strand at 689.059 kb on + strand, within SM_b21055 at 689.059 kb on + strand, within SM_b21055 at 689.188 kb on + strand, within SM_b21055 at 689.188 kb on + strand, within SM_b21055 at 689.189 kb on - strand, within SM_b21055 at 689.193 kb on - strand, within SM_b21055 at 689.369 kb on + strand at 689.410 kb on - strand at 689.427 kb on + strand at 689.468 kb on + strand at 689.469 kb on - strand at 689.469 kb on - strand at 689.469 kb on - strand at 689.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 686,912 - SM_b21053 0.28 -1.5 686,912 - SM_b21053 0.28 -0.1 686,934 - SM_b21053 0.29 -1.7 686,956 - SM_b21053 0.31 -1.6 687,062 + SM_b21053 0.40 +0.2 687,062 + SM_b21053 0.40 -0.8 687,062 + SM_b21053 0.40 -0.2 687,191 + SM_b21053 0.50 -0.2 687,212 + SM_b21053 0.52 +0.7 687,242 + SM_b21053 0.54 +0.9 687,242 + SM_b21053 0.54 -1.4 687,304 + SM_b21053 0.59 -0.6 687,377 - SM_b21053 0.65 +0.6 687,401 - SM_b21053 0.67 +0.5 687,496 + SM_b21053 0.74 -0.3 687,497 - SM_b21053 0.74 +0.0 687,497 - SM_b21053 0.74 -1.9 687,514 - SM_b21053 0.76 -1.3 687,607 - SM_b21053 0.83 +0.1 687,607 - SM_b21053 0.83 -0.1 687,683 + SM_b21053 0.89 -0.2 687,684 - SM_b21053 0.89 +0.2 687,786 - -0.6 687,797 - -1.4 687,824 + -0.6 687,824 + -0.4 687,824 + +2.0 687,825 - +0.3 687,831 + +1.1 687,831 + +1.3 687,831 + +0.1 687,832 - +0.4 687,832 - -1.0 687,832 - -0.5 687,832 - +0.1 687,947 - +0.9 687,947 - -0.0 687,947 - -0.0 687,949 - +0.5 687,949 - +0.5 687,961 - -0.0 688,015 + SM_b21054 0.18 +2.2 688,051 - SM_b21054 0.24 +0.2 688,190 - SM_b21054 0.46 -0.2 688,204 - SM_b21054 0.48 +1.2 688,204 - SM_b21054 0.48 +0.3 688,216 + SM_b21054 0.50 -0.3 688,217 - SM_b21054 0.50 +0.7 688,249 + SM_b21054 0.56 +0.3 688,250 - SM_b21054 0.56 +0.5 688,276 + SM_b21054 0.60 -0.7 688,286 + SM_b21054 0.62 +1.0 688,287 - SM_b21054 0.62 -0.1 688,302 + SM_b21054 0.64 -1.4 688,395 + SM_b21054 0.79 -1.0 688,406 - SM_b21054 0.81 +0.9 688,447 + SM_b21054 0.88 +0.1 688,518 + -0.6 688,518 + -0.2 688,519 - -2.8 688,519 - +1.0 688,519 - +1.6 688,519 - -0.5 688,545 - +0.0 688,565 + +0.7 688,566 - -0.1 688,566 - -0.4 688,613 + +0.1 688,614 - +0.9 688,641 - -1.0 688,641 - -1.9 688,680 + +0.2 688,718 + -0.5 689,059 + SM_b21055 0.52 +0.5 689,059 + SM_b21055 0.52 -0.5 689,188 + SM_b21055 0.74 +0.2 689,188 + SM_b21055 0.74 +0.7 689,189 - SM_b21055 0.74 -0.1 689,193 - SM_b21055 0.75 -0.2 689,369 + -1.0 689,410 - -0.4 689,427 + -0.2 689,468 + -0.4 689,469 - -0.6 689,469 - -0.1 689,469 - -0.2 689,475 + -0.1
Or see this region's nucleotide sequence