Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21048 and SM_b21049 are separated by 45 nucleotides SM_b21049 and SM_b21050 are separated by 212 nucleotides SM_b21050 and SM_b21051 are separated by 150 nucleotides
SM_b21048: SM_b21048 - hypothetical protein, at 680,362 to 681,807
_b21048
SM_b21049: SM_b21049 - hypothetical protein, at 681,853 to 682,011
_b21049
SM_b21050: SM_b21050 - PST type surface saccharide translocase, ExoT protein, at 682,224 to 683,777
_b21050
SM_b21051: SM_b21051 - udpglucosegdpmannose dehydrogenase, at 683,928 to 685,277
_b21051
Position (kb) 682
683
684 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 681.294 kb on + strand, within SM_b21048 at 681.294 kb on + strand, within SM_b21048 at 681.294 kb on + strand, within SM_b21048 at 681.321 kb on + strand, within SM_b21048 at 681.349 kb on + strand, within SM_b21048 at 681.359 kb on - strand, within SM_b21048 at 681.359 kb on - strand, within SM_b21048 at 681.359 kb on - strand, within SM_b21048 at 681.392 kb on + strand, within SM_b21048 at 681.472 kb on + strand, within SM_b21048 at 681.472 kb on + strand, within SM_b21048 at 681.473 kb on - strand, within SM_b21048 at 681.527 kb on + strand, within SM_b21048 at 681.528 kb on - strand, within SM_b21048 at 681.528 kb on - strand, within SM_b21048 at 681.528 kb on - strand, within SM_b21048 at 681.647 kb on + strand, within SM_b21048 at 681.647 kb on + strand, within SM_b21048 at 681.648 kb on - strand, within SM_b21048 at 681.648 kb on - strand, within SM_b21048 at 681.749 kb on + strand at 681.750 kb on - strand at 681.753 kb on - strand at 681.753 kb on - strand at 681.753 kb on - strand at 681.753 kb on - strand at 681.753 kb on - strand at 681.758 kb on - strand at 681.758 kb on - strand at 681.758 kb on - strand at 681.761 kb on - strand at 681.782 kb on - strand at 681.855 kb on - strand at 681.920 kb on + strand, within SM_b21049 at 681.921 kb on - strand, within SM_b21049 at 681.921 kb on - strand, within SM_b21049 at 681.942 kb on - strand, within SM_b21049 at 682.037 kb on - strand at 682.037 kb on - strand at 682.083 kb on - strand at 682.128 kb on + strand at 682.128 kb on + strand at 682.129 kb on - strand at 682.209 kb on + strand at 682.209 kb on + strand at 682.231 kb on + strand at 682.232 kb on - strand at 682.232 kb on - strand at 682.232 kb on - strand at 682.232 kb on - strand at 682.252 kb on + strand at 682.265 kb on - strand at 682.292 kb on - strand at 682.441 kb on + strand, within SM_b21050 at 682.441 kb on + strand, within SM_b21050 at 682.442 kb on - strand, within SM_b21050 at 682.442 kb on - strand, within SM_b21050 at 682.495 kb on + strand, within SM_b21050 at 682.496 kb on - strand, within SM_b21050 at 682.496 kb on - strand, within SM_b21050 at 682.693 kb on + strand, within SM_b21050 at 682.694 kb on - strand, within SM_b21050 at 682.880 kb on - strand, within SM_b21050 at 682.923 kb on - strand, within SM_b21050 at 682.929 kb on + strand, within SM_b21050 at 682.990 kb on + strand, within SM_b21050 at 683.108 kb on - strand, within SM_b21050 at 683.108 kb on - strand at 683.108 kb on - strand, within SM_b21050 at 683.323 kb on + strand, within SM_b21050 at 683.323 kb on + strand, within SM_b21050 at 683.361 kb on + strand, within SM_b21050 at 683.361 kb on + strand, within SM_b21050 at 683.415 kb on + strand, within SM_b21050 at 683.415 kb on + strand, within SM_b21050 at 683.416 kb on - strand, within SM_b21050 at 683.416 kb on - strand, within SM_b21050 at 683.416 kb on - strand, within SM_b21050 at 683.418 kb on - strand, within SM_b21050 at 683.459 kb on + strand, within SM_b21050 at 683.474 kb on - strand, within SM_b21050 at 683.474 kb on - strand, within SM_b21050 at 683.526 kb on + strand, within SM_b21050 at 683.526 kb on + strand, within SM_b21050 at 683.526 kb on + strand, within SM_b21050 at 683.531 kb on - strand, within SM_b21050 at 683.531 kb on - strand, within SM_b21050 at 683.531 kb on - strand, within SM_b21050 at 683.537 kb on + strand, within SM_b21050 at 683.537 kb on + strand, within SM_b21050 at 683.538 kb on - strand, within SM_b21050 at 683.538 kb on - strand, within SM_b21050 at 683.538 kb on - strand, within SM_b21050 at 683.546 kb on + strand, within SM_b21050 at 683.618 kb on + strand, within SM_b21050 at 683.619 kb on - strand, within SM_b21050 at 683.700 kb on + strand at 683.700 kb on + strand at 683.700 kb on + strand at 683.700 kb on + strand at 683.701 kb on - strand at 683.701 kb on - strand at 683.701 kb on - strand at 683.701 kb on - strand at 683.701 kb on - strand at 683.761 kb on + strand at 683.761 kb on + strand at 683.761 kb on + strand at 683.762 kb on - strand at 683.858 kb on - strand at 683.858 kb on - strand at 683.858 kb on - strand at 683.883 kb on + strand at 683.884 kb on - strand at 683.899 kb on + strand at 683.900 kb on - strand at 683.930 kb on - strand at 683.930 kb on - strand at 683.937 kb on + strand at 683.938 kb on - strand at 683.945 kb on + strand at 683.945 kb on + strand at 683.946 kb on - strand at 683.946 kb on - strand at 684.089 kb on + strand, within SM_b21051 at 684.090 kb on - strand, within SM_b21051 at 684.111 kb on + strand, within SM_b21051 at 684.112 kb on - strand, within SM_b21051 at 684.121 kb on + strand, within SM_b21051 at 684.122 kb on - strand, within SM_b21051 at 684.147 kb on + strand, within SM_b21051 at 684.147 kb on + strand, within SM_b21051 at 684.148 kb on - strand, within SM_b21051 at 684.151 kb on + strand, within SM_b21051 at 684.152 kb on - strand, within SM_b21051 at 684.163 kb on + strand, within SM_b21051 at 684.164 kb on - strand, within SM_b21051 at 684.227 kb on + strand, within SM_b21051 at 684.247 kb on + strand, within SM_b21051 at 684.247 kb on + strand, within SM_b21051 at 684.248 kb on - strand, within SM_b21051 at 684.265 kb on - strand, within SM_b21051 at 684.334 kb on + strand, within SM_b21051 at 684.334 kb on + strand, within SM_b21051 at 684.335 kb on - strand, within SM_b21051 at 684.366 kb on + strand, within SM_b21051 at 684.366 kb on + strand, within SM_b21051 at 684.367 kb on - strand, within SM_b21051 at 684.372 kb on + strand, within SM_b21051 at 684.387 kb on + strand, within SM_b21051 at 684.388 kb on - strand, within SM_b21051 at 684.388 kb on - strand, within SM_b21051 at 684.395 kb on - strand, within SM_b21051 at 684.418 kb on + strand, within SM_b21051 at 684.419 kb on - strand, within SM_b21051 at 684.476 kb on + strand, within SM_b21051 at 684.477 kb on - strand, within SM_b21051 at 684.477 kb on - strand, within SM_b21051 at 684.477 kb on - strand, within SM_b21051 at 684.478 kb on + strand, within SM_b21051 at 684.479 kb on - strand, within SM_b21051 at 684.588 kb on + strand, within SM_b21051 at 684.589 kb on - strand, within SM_b21051 at 684.589 kb on - strand, within SM_b21051 at 684.600 kb on + strand, within SM_b21051 at 684.600 kb on + strand, within SM_b21051 at 684.664 kb on + strand, within SM_b21051 at 684.664 kb on + strand, within SM_b21051 at 684.665 kb on - strand, within SM_b21051 at 684.665 kb on - strand, within SM_b21051 at 684.773 kb on - strand, within SM_b21051
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 681,294 + SM_b21048 0.64 -2.7 681,294 + SM_b21048 0.64 -0.1 681,294 + SM_b21048 0.64 +0.6 681,321 + SM_b21048 0.66 -0.3 681,349 + SM_b21048 0.68 -0.5 681,359 - SM_b21048 0.69 -0.1 681,359 - SM_b21048 0.69 +0.7 681,359 - SM_b21048 0.69 +0.1 681,392 + SM_b21048 0.71 -0.4 681,472 + SM_b21048 0.77 -0.2 681,472 + SM_b21048 0.77 -0.5 681,473 - SM_b21048 0.77 -0.2 681,527 + SM_b21048 0.81 +0.2 681,528 - SM_b21048 0.81 -1.3 681,528 - SM_b21048 0.81 +0.2 681,528 - SM_b21048 0.81 -1.8 681,647 + SM_b21048 0.89 -1.9 681,647 + SM_b21048 0.89 +0.1 681,648 - SM_b21048 0.89 -1.1 681,648 - SM_b21048 0.89 -0.6 681,749 + +0.2 681,750 - -1.5 681,753 - -0.7 681,753 - -0.5 681,753 - +0.3 681,753 - +0.6 681,753 - +1.0 681,758 - -0.6 681,758 - +0.4 681,758 - +1.2 681,761 - +1.8 681,782 - +0.1 681,855 - +0.7 681,920 + SM_b21049 0.42 -1.6 681,921 - SM_b21049 0.43 -0.2 681,921 - SM_b21049 0.43 -0.7 681,942 - SM_b21049 0.56 +0.7 682,037 - -0.4 682,037 - -0.3 682,083 - -0.3 682,128 + +1.0 682,128 + -2.1 682,129 - +0.2 682,209 + -0.3 682,209 + -0.0 682,231 + +0.9 682,232 - -0.3 682,232 - -0.3 682,232 - +0.3 682,232 - -2.2 682,252 + -0.7 682,265 - -1.4 682,292 - -0.1 682,441 + SM_b21050 0.14 -0.0 682,441 + SM_b21050 0.14 +0.9 682,442 - SM_b21050 0.14 -0.2 682,442 - SM_b21050 0.14 -0.1 682,495 + SM_b21050 0.17 -0.1 682,496 - SM_b21050 0.18 -0.2 682,496 - SM_b21050 0.18 +0.4 682,693 + SM_b21050 0.30 +0.2 682,694 - SM_b21050 0.30 -0.5 682,880 - SM_b21050 0.42 -2.1 682,923 - SM_b21050 0.45 +1.3 682,929 + SM_b21050 0.45 +0.8 682,990 + SM_b21050 0.49 -0.3 683,108 - SM_b21050 0.57 -0.0 683,108 - -0.1 683,108 - SM_b21050 0.57 -2.5 683,323 + SM_b21050 0.71 -0.2 683,323 + SM_b21050 0.71 +0.2 683,361 + SM_b21050 0.73 +0.5 683,361 + SM_b21050 0.73 -0.0 683,415 + SM_b21050 0.77 -0.7 683,415 + SM_b21050 0.77 +0.4 683,416 - SM_b21050 0.77 +0.9 683,416 - SM_b21050 0.77 +0.9 683,416 - SM_b21050 0.77 +1.0 683,418 - SM_b21050 0.77 +0.1 683,459 + SM_b21050 0.79 +2.6 683,474 - SM_b21050 0.80 -0.0 683,474 - SM_b21050 0.80 +0.4 683,526 + SM_b21050 0.84 -0.9 683,526 + SM_b21050 0.84 -1.2 683,526 + SM_b21050 0.84 +1.7 683,531 - SM_b21050 0.84 -0.1 683,531 - SM_b21050 0.84 +0.7 683,531 - SM_b21050 0.84 +0.4 683,537 + SM_b21050 0.84 +1.2 683,537 + SM_b21050 0.84 +0.5 683,538 - SM_b21050 0.85 +0.3 683,538 - SM_b21050 0.85 -0.6 683,538 - SM_b21050 0.85 +0.5 683,546 + SM_b21050 0.85 +0.7 683,618 + SM_b21050 0.90 +1.1 683,619 - SM_b21050 0.90 +0.1 683,700 + +0.6 683,700 + +0.1 683,700 + -0.3 683,700 + +0.7 683,701 - -0.7 683,701 - +0.0 683,701 - +0.5 683,701 - -1.7 683,701 - +1.1 683,761 + -0.4 683,761 + -1.8 683,761 + +0.3 683,762 - +0.4 683,858 - +1.7 683,858 - -0.1 683,858 - +0.3 683,883 + -0.4 683,884 - -0.2 683,899 + +0.9 683,900 - -1.0 683,930 - +0.5 683,930 - -0.5 683,937 + -0.3 683,938 - +0.8 683,945 + +1.2 683,945 + +0.9 683,946 - +0.1 683,946 - -2.3 684,089 + SM_b21051 0.12 +0.6 684,090 - SM_b21051 0.12 +0.9 684,111 + SM_b21051 0.14 +0.0 684,112 - SM_b21051 0.14 +0.1 684,121 + SM_b21051 0.14 -0.8 684,122 - SM_b21051 0.14 -1.9 684,147 + SM_b21051 0.16 +0.3 684,147 + SM_b21051 0.16 +0.3 684,148 - SM_b21051 0.16 +1.0 684,151 + SM_b21051 0.17 -0.1 684,152 - SM_b21051 0.17 +0.6 684,163 + SM_b21051 0.17 -3.0 684,164 - SM_b21051 0.17 -0.0 684,227 + SM_b21051 0.22 +0.9 684,247 + SM_b21051 0.24 -0.5 684,247 + SM_b21051 0.24 -0.5 684,248 - SM_b21051 0.24 -0.0 684,265 - SM_b21051 0.25 +0.6 684,334 + SM_b21051 0.30 -0.7 684,334 + SM_b21051 0.30 -1.6 684,335 - SM_b21051 0.30 -0.1 684,366 + SM_b21051 0.32 +0.3 684,366 + SM_b21051 0.32 -0.1 684,367 - SM_b21051 0.33 +0.8 684,372 + SM_b21051 0.33 -0.5 684,387 + SM_b21051 0.34 -0.5 684,388 - SM_b21051 0.34 -0.9 684,388 - SM_b21051 0.34 -0.5 684,395 - SM_b21051 0.35 -0.2 684,418 + SM_b21051 0.36 +0.2 684,419 - SM_b21051 0.36 -1.5 684,476 + SM_b21051 0.41 -0.2 684,477 - SM_b21051 0.41 -0.3 684,477 - SM_b21051 0.41 -0.4 684,477 - SM_b21051 0.41 +0.1 684,478 + SM_b21051 0.41 +0.9 684,479 - SM_b21051 0.41 +2.5 684,588 + SM_b21051 0.49 +0.2 684,589 - SM_b21051 0.49 -1.4 684,589 - SM_b21051 0.49 -0.8 684,600 + SM_b21051 0.50 -0.2 684,600 + SM_b21051 0.50 -0.1 684,664 + SM_b21051 0.55 -0.9 684,664 + SM_b21051 0.55 -0.1 684,665 - SM_b21051 0.55 -0.8 684,665 - SM_b21051 0.55 +1.7 684,773 - SM_b21051 0.63 -0.6
Or see this region's nucleotide sequence