Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21037 and SM_b21038 are separated by 6 nucleotides SM_b21038 and SM_b21039 are separated by 13 nucleotides SM_b21039 and SM_b21040 overlap by 4 nucleotides
SM_b21037: SM_b21037 - oligopeptidemurein peptide ABC transporter substrate-binding protein precursor, at 654,648 to 656,243
_b21037
SM_b21038: SM_b21038 - oligopeptidemurein peptide ABC transporter permease, at 656,250 to 657,227
_b21038
SM_b21039: SM_b21039 - oligopeptidemurein peptide ABC transporter permease, at 657,241 to 658,116
_b21039
SM_b21040: SM_b21040 - oligopeptidemurein peptide ABC transporter ATP-binding protein, at 658,113 to 659,786
_b21040
Position (kb) 657
658
659 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 656.384 kb on + strand, within SM_b21038 at 656.448 kb on + strand, within SM_b21038 at 656.449 kb on - strand, within SM_b21038 at 656.496 kb on + strand, within SM_b21038 at 656.496 kb on + strand, within SM_b21038 at 656.496 kb on + strand, within SM_b21038 at 656.496 kb on + strand, within SM_b21038 at 656.497 kb on - strand, within SM_b21038 at 656.497 kb on - strand, within SM_b21038 at 656.497 kb on - strand, within SM_b21038 at 656.497 kb on - strand, within SM_b21038 at 656.497 kb on - strand, within SM_b21038 at 656.501 kb on - strand, within SM_b21038 at 656.502 kb on + strand, within SM_b21038 at 656.502 kb on + strand, within SM_b21038 at 656.502 kb on + strand, within SM_b21038 at 656.502 kb on + strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.503 kb on - strand, within SM_b21038 at 656.812 kb on + strand, within SM_b21038 at 656.813 kb on - strand, within SM_b21038 at 656.837 kb on - strand, within SM_b21038 at 656.909 kb on - strand, within SM_b21038 at 656.913 kb on + strand, within SM_b21038 at 657.189 kb on + strand at 657.190 kb on - strand at 657.190 kb on - strand at 657.322 kb on + strand at 657.322 kb on + strand at 657.323 kb on - strand at 657.323 kb on - strand at 657.389 kb on - strand, within SM_b21039 at 657.417 kb on + strand, within SM_b21039 at 657.417 kb on + strand, within SM_b21039 at 657.436 kb on + strand, within SM_b21039 at 657.437 kb on - strand, within SM_b21039 at 657.443 kb on - strand, within SM_b21039 at 657.494 kb on - strand, within SM_b21039 at 657.690 kb on - strand, within SM_b21039 at 657.733 kb on + strand, within SM_b21039 at 657.733 kb on + strand, within SM_b21039 at 657.734 kb on - strand, within SM_b21039 at 657.734 kb on - strand, within SM_b21039 at 657.734 kb on - strand, within SM_b21039 at 657.781 kb on + strand, within SM_b21039 at 657.782 kb on - strand, within SM_b21039 at 657.875 kb on + strand, within SM_b21039 at 657.988 kb on + strand, within SM_b21039 at 657.988 kb on + strand, within SM_b21039 at 658.006 kb on + strand, within SM_b21039 at 658.724 kb on - strand, within SM_b21040 at 658.724 kb on - strand, within SM_b21040 at 658.882 kb on - strand, within SM_b21040 at 658.978 kb on + strand, within SM_b21040 at 658.979 kb on - strand, within SM_b21040
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 656,384 + SM_b21038 0.14 -1.6 656,448 + SM_b21038 0.20 +0.4 656,449 - SM_b21038 0.20 +0.4 656,496 + SM_b21038 0.25 +0.4 656,496 + SM_b21038 0.25 -0.4 656,496 + SM_b21038 0.25 +0.4 656,496 + SM_b21038 0.25 -0.0 656,497 - SM_b21038 0.25 +0.4 656,497 - SM_b21038 0.25 -0.1 656,497 - SM_b21038 0.25 +2.7 656,497 - SM_b21038 0.25 +1.1 656,497 - SM_b21038 0.25 +0.1 656,501 - SM_b21038 0.26 -0.0 656,502 + SM_b21038 0.26 -1.4 656,502 + SM_b21038 0.26 -0.9 656,502 + SM_b21038 0.26 +0.0 656,502 + SM_b21038 0.26 -1.4 656,503 - SM_b21038 0.26 +0.7 656,503 - SM_b21038 0.26 -0.5 656,503 - SM_b21038 0.26 +0.1 656,503 - SM_b21038 0.26 +0.9 656,503 - SM_b21038 0.26 -1.6 656,503 - SM_b21038 0.26 -1.0 656,503 - SM_b21038 0.26 -0.4 656,503 - SM_b21038 0.26 +1.1 656,812 + SM_b21038 0.57 -0.3 656,813 - SM_b21038 0.58 +0.3 656,837 - SM_b21038 0.60 +0.5 656,909 - SM_b21038 0.67 -1.1 656,913 + SM_b21038 0.68 -0.7 657,189 + -0.1 657,190 - -2.3 657,190 - -2.1 657,322 + +0.4 657,322 + +0.4 657,323 - -3.1 657,323 - -0.2 657,389 - SM_b21039 0.17 -0.2 657,417 + SM_b21039 0.20 +0.1 657,417 + SM_b21039 0.20 -0.1 657,436 + SM_b21039 0.22 +1.4 657,437 - SM_b21039 0.22 -1.6 657,443 - SM_b21039 0.23 +0.6 657,494 - SM_b21039 0.29 +0.7 657,690 - SM_b21039 0.51 +0.3 657,733 + SM_b21039 0.56 +1.1 657,733 + SM_b21039 0.56 -0.0 657,734 - SM_b21039 0.56 +0.2 657,734 - SM_b21039 0.56 +0.1 657,734 - SM_b21039 0.56 -0.7 657,781 + SM_b21039 0.62 +3.2 657,782 - SM_b21039 0.62 +0.1 657,875 + SM_b21039 0.72 +0.4 657,988 + SM_b21039 0.85 +0.7 657,988 + SM_b21039 0.85 +1.3 658,006 + SM_b21039 0.87 +0.5 658,724 - SM_b21040 0.36 -1.3 658,724 - SM_b21040 0.36 +0.1 658,882 - SM_b21040 0.46 -1.4 658,978 + SM_b21040 0.52 +1.5 658,979 - SM_b21040 0.52 +0.5
Or see this region's nucleotide sequence