Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21027 and SM_b21028 are separated by 214 nucleotides SM_b21028 and SM_b21029 are separated by 97 nucleotides SM_b21029 and SM_b21030 are separated by 144 nucleotides SM_b21030 and SM_b21031 are separated by 11 nucleotides
SM_b21027: SM_b21027 - hypothetical protein, at 648,788 to 649,504
_b21027
SM_b21028: SM_b21028 - hypothetical protein, at 649,719 to 649,880
_b21028
SM_b21029: SM_b21029 - hypothetical protein, at 649,978 to 650,502
_b21029
SM_b21030: SM_b21030 - hypothetical protein, at 650,647 to 651,096
_b21030
SM_b21031: SM_b21031 - hypothetical protein, at 651,108 to 651,719
_b21031
Position (kb) 649
650
651 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 649.172 kb on - strand, within SM_b21027 at 649.172 kb on - strand, within SM_b21027 at 649.172 kb on - strand, within SM_b21027 at 649.175 kb on + strand, within SM_b21027 at 649.176 kb on - strand, within SM_b21027 at 649.176 kb on - strand, within SM_b21027 at 649.176 kb on - strand, within SM_b21027 at 649.420 kb on + strand, within SM_b21027 at 649.447 kb on + strand at 649.560 kb on + strand at 649.560 kb on + strand at 649.560 kb on + strand at 649.561 kb on - strand at 649.611 kb on - strand at 649.644 kb on + strand at 649.645 kb on - strand at 649.654 kb on + strand at 649.657 kb on - strand at 649.657 kb on - strand at 649.707 kb on + strand at 649.707 kb on + strand at 649.707 kb on + strand at 649.708 kb on - strand at 649.708 kb on - strand at 649.711 kb on + strand at 649.712 kb on - strand at 649.712 kb on - strand at 649.758 kb on + strand, within SM_b21028 at 649.825 kb on + strand, within SM_b21028 at 649.845 kb on + strand, within SM_b21028 at 649.846 kb on - strand, within SM_b21028 at 649.900 kb on + strand at 649.900 kb on + strand at 649.901 kb on - strand at 649.925 kb on - strand at 649.929 kb on - strand at 649.936 kb on - strand at 649.936 kb on - strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.977 kb on + strand at 649.978 kb on - strand at 649.978 kb on - strand at 650.129 kb on - strand, within SM_b21029 at 650.136 kb on + strand, within SM_b21029 at 650.214 kb on - strand, within SM_b21029 at 650.281 kb on - strand, within SM_b21029 at 650.345 kb on + strand, within SM_b21029 at 650.346 kb on - strand, within SM_b21029 at 650.436 kb on + strand, within SM_b21029 at 650.436 kb on + strand, within SM_b21029 at 650.437 kb on - strand, within SM_b21029 at 650.437 kb on - strand, within SM_b21029 at 650.500 kb on + strand at 650.500 kb on + strand at 650.550 kb on + strand at 650.550 kb on + strand at 650.551 kb on - strand at 650.556 kb on + strand at 650.556 kb on + strand at 650.556 kb on + strand at 650.556 kb on + strand at 650.557 kb on - strand at 650.589 kb on - strand at 650.754 kb on + strand, within SM_b21030 at 651.080 kb on - strand at 651.080 kb on - strand at 651.080 kb on - strand at 651.300 kb on + strand, within SM_b21031 at 651.315 kb on + strand, within SM_b21031 at 651.315 kb on + strand, within SM_b21031 at 651.316 kb on - strand, within SM_b21031 at 651.316 kb on - strand, within SM_b21031 at 651.316 kb on - strand, within SM_b21031 at 651.395 kb on + strand, within SM_b21031 at 651.396 kb on - strand, within SM_b21031 at 651.431 kb on + strand, within SM_b21031 at 651.432 kb on - strand, within SM_b21031 at 651.466 kb on - strand, within SM_b21031
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 649,172 - SM_b21027 0.54 -0.0 649,172 - SM_b21027 0.54 +2.0 649,172 - SM_b21027 0.54 +0.1 649,175 + SM_b21027 0.54 -1.4 649,176 - SM_b21027 0.54 +0.3 649,176 - SM_b21027 0.54 +0.9 649,176 - SM_b21027 0.54 +0.2 649,420 + SM_b21027 0.88 -0.2 649,447 + -1.1 649,560 + -0.4 649,560 + -0.7 649,560 + +1.1 649,561 - -0.5 649,611 - -1.3 649,644 + -1.4 649,645 - -0.4 649,654 + +0.1 649,657 - +0.1 649,657 - -0.0 649,707 + -0.5 649,707 + +0.4 649,707 + -0.0 649,708 - -0.8 649,708 - +0.2 649,711 + -1.4 649,712 - -0.3 649,712 - -0.1 649,758 + SM_b21028 0.24 -1.1 649,825 + SM_b21028 0.65 +2.3 649,845 + SM_b21028 0.78 +0.1 649,846 - SM_b21028 0.78 +0.5 649,900 + -0.4 649,900 + +0.7 649,901 - +1.0 649,925 - +0.6 649,929 - +0.8 649,936 - -0.9 649,936 - +0.8 649,977 + -0.5 649,977 + -0.8 649,977 + +0.7 649,977 + -0.4 649,977 + +0.7 649,978 - -1.7 649,978 - +0.9 650,129 - SM_b21029 0.29 -2.5 650,136 + SM_b21029 0.30 +0.9 650,214 - SM_b21029 0.45 +0.5 650,281 - SM_b21029 0.58 +1.1 650,345 + SM_b21029 0.70 +2.9 650,346 - SM_b21029 0.70 +1.1 650,436 + SM_b21029 0.87 -0.7 650,436 + SM_b21029 0.87 -0.5 650,437 - SM_b21029 0.87 +0.0 650,437 - SM_b21029 0.87 +0.7 650,500 + -0.9 650,500 + +0.8 650,550 + -1.1 650,550 + -0.7 650,551 - -0.8 650,556 + +1.1 650,556 + +0.6 650,556 + -0.0 650,556 + -1.8 650,557 - -1.6 650,589 - +0.4 650,754 + SM_b21030 0.24 -2.3 651,080 - +0.9 651,080 - -0.1 651,080 - -1.1 651,300 + SM_b21031 0.31 +0.6 651,315 + SM_b21031 0.34 +0.2 651,315 + SM_b21031 0.34 +0.2 651,316 - SM_b21031 0.34 -0.1 651,316 - SM_b21031 0.34 +2.7 651,316 - SM_b21031 0.34 -0.3 651,395 + SM_b21031 0.47 +2.0 651,396 - SM_b21031 0.47 +0.3 651,431 + SM_b21031 0.53 +1.2 651,432 - SM_b21031 0.53 -2.9 651,466 - SM_b21031 0.58 -1.4
Or see this region's nucleotide sequence