Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21000 and SM_b21001 overlap by 14 nucleotides SM_b21001 and SM_b21002 are separated by 77 nucleotides SM_b21002 and SM_b21003 are separated by 64 nucleotides
SM_b21000: SM_b21000 - transporter, at 1,236,556 to 1,237,689
_b21000
SM_b21001: SM_b21001 - hypothetical protein, at 1,237,676 to 1,238,050
_b21001
SM_b21002: SM_b21002 - methionine aminopeptidase, at 1,238,128 to 1,238,877
_b21002
SM_b21003: SM_b21003 - oxidoreductase, at 1,238,942 to 1,239,985
_b21003
Position (kb)
1238
1239 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1237.288 kb on - strand, within SM_b21000 at 1237.458 kb on + strand at 1237.458 kb on + strand, within SM_b21000 at 1237.458 kb on + strand, within SM_b21000 at 1237.458 kb on + strand, within SM_b21000 at 1237.458 kb on + strand, within SM_b21000 at 1237.458 kb on + strand, within SM_b21000 at 1237.458 kb on + strand, within SM_b21000 at 1237.458 kb on + strand, within SM_b21000 at 1237.459 kb on - strand, within SM_b21000 at 1237.459 kb on - strand, within SM_b21000 at 1237.459 kb on - strand, within SM_b21000 at 1237.459 kb on - strand, within SM_b21000 at 1237.569 kb on - strand, within SM_b21000 at 1237.654 kb on - strand at 1237.655 kb on + strand at 1237.655 kb on + strand at 1237.656 kb on - strand at 1237.866 kb on + strand, within SM_b21001 at 1237.866 kb on + strand, within SM_b21001 at 1237.866 kb on + strand, within SM_b21001 at 1237.867 kb on - strand, within SM_b21001 at 1238.187 kb on - strand at 1238.187 kb on - strand at 1238.216 kb on + strand, within SM_b21002 at 1238.216 kb on + strand, within SM_b21002 at 1238.604 kb on + strand, within SM_b21002 at 1238.604 kb on + strand, within SM_b21002 at 1238.605 kb on - strand, within SM_b21002 at 1238.699 kb on + strand, within SM_b21002 at 1238.700 kb on - strand, within SM_b21002 at 1238.904 kb on + strand at 1238.904 kb on + strand at 1238.905 kb on - strand at 1238.922 kb on + strand at 1238.922 kb on + strand at 1238.922 kb on + strand at 1239.238 kb on - strand, within SM_b21003 at 1239.553 kb on + strand, within SM_b21003 at 1239.603 kb on + strand, within SM_b21003 at 1239.604 kb on - strand, within SM_b21003 at 1239.604 kb on - strand, within SM_b21003
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,237,288 - SM_b21000 0.65 -0.1 1,237,458 + -1.1 1,237,458 + SM_b21000 0.80 -0.4 1,237,458 + SM_b21000 0.80 -0.7 1,237,458 + SM_b21000 0.80 -0.1 1,237,458 + SM_b21000 0.80 +0.0 1,237,458 + SM_b21000 0.80 -0.5 1,237,458 + SM_b21000 0.80 +0.2 1,237,458 + SM_b21000 0.80 -0.6 1,237,459 - SM_b21000 0.80 -0.3 1,237,459 - SM_b21000 0.80 +0.5 1,237,459 - SM_b21000 0.80 -0.5 1,237,459 - SM_b21000 0.80 +0.2 1,237,569 - SM_b21000 0.89 -1.0 1,237,654 - -0.5 1,237,655 + -0.6 1,237,655 + -0.7 1,237,656 - +1.5 1,237,866 + SM_b21001 0.51 -1.2 1,237,866 + SM_b21001 0.51 +0.0 1,237,866 + SM_b21001 0.51 -0.3 1,237,867 - SM_b21001 0.51 -0.9 1,238,187 - -0.6 1,238,187 - +0.9 1,238,216 + SM_b21002 0.12 +0.3 1,238,216 + SM_b21002 0.12 +1.2 1,238,604 + SM_b21002 0.63 +1.5 1,238,604 + SM_b21002 0.63 +1.4 1,238,605 - SM_b21002 0.64 +0.8 1,238,699 + SM_b21002 0.76 +1.1 1,238,700 - SM_b21002 0.76 -0.1 1,238,904 + +0.3 1,238,904 + +0.4 1,238,905 - +0.6 1,238,922 + +0.6 1,238,922 + +0.3 1,238,922 + -0.1 1,239,238 - SM_b21003 0.28 +0.4 1,239,553 + SM_b21003 0.59 -1.3 1,239,603 + SM_b21003 0.63 -1.9 1,239,604 - SM_b21003 0.63 +0.2 1,239,604 - SM_b21003 0.63 +2.1
Or see this region's nucleotide sequence