Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20935 and SM_b20936 are separated by 221 nucleotides SM_b20936 and SM_b20937 are separated by 38 nucleotides SM_b20937 and SM_b20938 are separated by 46 nucleotides SM_b20938 and SM_b20939 overlap by 4 nucleotides
SM_b20935: SM_b20935 - transcriptional regulator, at 1,160,892 to 1,161,143
_b20935
SM_b20936: SM_b20936 - hypothetical protein, at 1,161,365 to 1,161,952
_b20936
SM_b20937: SM_b20937 - ABC transporter ATP-binding protein/permease, at 1,161,991 to 1,163,811
_b20937
SM_b20938: SM_b20938 - hypothetical protein, at 1,163,858 to 1,164,595
_b20938
SM_b20939: SM_b20939 - 6-pyruvoyl-tetrahydropterin synthase, at 1,164,592 to 1,164,951
_b20939
Position (kb)
1161
1162
1163
1164 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1161.044 kb on - strand, within SM_b20935 at 1161.044 kb on - strand, within SM_b20935 at 1161.137 kb on + strand at 1161.143 kb on + strand at 1161.143 kb on + strand at 1161.143 kb on + strand at 1161.143 kb on + strand at 1161.143 kb on + strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.144 kb on - strand at 1161.326 kb on - strand at 1161.571 kb on - strand, within SM_b20936 at 1161.590 kb on + strand, within SM_b20936 at 1161.621 kb on + strand, within SM_b20936 at 1161.621 kb on + strand, within SM_b20936 at 1161.622 kb on - strand, within SM_b20936 at 1161.622 kb on - strand, within SM_b20936 at 1161.704 kb on - strand, within SM_b20936 at 1161.709 kb on + strand, within SM_b20936 at 1161.710 kb on - strand, within SM_b20936 at 1161.710 kb on - strand, within SM_b20936 at 1161.721 kb on + strand, within SM_b20936 at 1161.722 kb on - strand, within SM_b20936 at 1161.733 kb on + strand, within SM_b20936 at 1161.733 kb on + strand, within SM_b20936 at 1161.734 kb on - strand, within SM_b20936 at 1161.739 kb on - strand, within SM_b20936 at 1161.766 kb on - strand, within SM_b20936 at 1161.766 kb on - strand, within SM_b20936 at 1161.766 kb on - strand, within SM_b20936 at 1161.776 kb on + strand, within SM_b20936 at 1161.951 kb on - strand at 1162.056 kb on + strand at 1162.056 kb on + strand at 1162.056 kb on + strand at 1162.057 kb on - strand at 1162.057 kb on - strand at 1162.117 kb on - strand at 1162.117 kb on - strand at 1162.121 kb on + strand at 1162.122 kb on - strand at 1162.149 kb on - strand at 1162.149 kb on - strand at 1162.251 kb on + strand, within SM_b20937 at 1162.251 kb on + strand, within SM_b20937 at 1162.251 kb on + strand, within SM_b20937 at 1162.252 kb on - strand, within SM_b20937 at 1162.252 kb on - strand, within SM_b20937 at 1162.252 kb on - strand, within SM_b20937 at 1162.252 kb on - strand, within SM_b20937 at 1162.597 kb on + strand, within SM_b20937 at 1162.597 kb on + strand, within SM_b20937 at 1162.598 kb on - strand, within SM_b20937 at 1162.740 kb on + strand, within SM_b20937 at 1162.740 kb on + strand, within SM_b20937 at 1162.740 kb on + strand, within SM_b20937 at 1162.741 kb on - strand, within SM_b20937 at 1162.832 kb on + strand, within SM_b20937 at 1162.833 kb on - strand, within SM_b20937 at 1162.874 kb on - strand, within SM_b20937 at 1162.899 kb on + strand, within SM_b20937 at 1162.900 kb on - strand, within SM_b20937 at 1162.953 kb on + strand, within SM_b20937 at 1162.953 kb on + strand, within SM_b20937 at 1162.953 kb on + strand, within SM_b20937 at 1162.954 kb on - strand, within SM_b20937 at 1162.954 kb on - strand, within SM_b20937 at 1162.954 kb on - strand, within SM_b20937 at 1162.954 kb on - strand, within SM_b20937 at 1162.954 kb on - strand, within SM_b20937 at 1163.206 kb on - strand, within SM_b20937 at 1163.838 kb on + strand at 1164.019 kb on + strand, within SM_b20938 at 1164.020 kb on - strand, within SM_b20938 at 1164.040 kb on - strand, within SM_b20938 at 1164.040 kb on - strand, within SM_b20938 at 1164.081 kb on + strand, within SM_b20938 at 1164.081 kb on + strand, within SM_b20938 at 1164.081 kb on + strand, within SM_b20938 at 1164.081 kb on + strand, within SM_b20938 at 1164.082 kb on - strand, within SM_b20938 at 1164.087 kb on + strand, within SM_b20938 at 1164.088 kb on - strand, within SM_b20938 at 1164.120 kb on - strand, within SM_b20938 at 1164.120 kb on - strand, within SM_b20938 at 1164.323 kb on + strand, within SM_b20938 at 1164.323 kb on + strand, within SM_b20938 at 1164.324 kb on - strand at 1164.324 kb on - strand, within SM_b20938 at 1164.432 kb on + strand, within SM_b20938 at 1164.603 kb on - strand at 1164.677 kb on + strand, within SM_b20939 at 1164.763 kb on - strand, within SM_b20939 at 1164.764 kb on + strand, within SM_b20939 at 1164.764 kb on + strand, within SM_b20939 at 1164.764 kb on + strand, within SM_b20939 at 1164.765 kb on - strand at 1164.791 kb on + strand, within SM_b20939
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,161,044 - SM_b20935 0.60 +0.3 1,161,044 - SM_b20935 0.60 -0.2 1,161,137 + +0.2 1,161,143 + +0.3 1,161,143 + -0.5 1,161,143 + -0.4 1,161,143 + +1.2 1,161,143 + +0.4 1,161,144 - +0.0 1,161,144 - +0.5 1,161,144 - +1.0 1,161,144 - +0.1 1,161,144 - -1.2 1,161,144 - -0.4 1,161,144 - +1.2 1,161,144 - +0.1 1,161,144 - +2.3 1,161,326 - -0.4 1,161,571 - SM_b20936 0.35 -0.3 1,161,590 + SM_b20936 0.38 +0.2 1,161,621 + SM_b20936 0.44 -1.2 1,161,621 + SM_b20936 0.44 +0.1 1,161,622 - SM_b20936 0.44 -0.4 1,161,622 - SM_b20936 0.44 +0.5 1,161,704 - SM_b20936 0.58 -1.5 1,161,709 + SM_b20936 0.59 -1.6 1,161,710 - SM_b20936 0.59 +0.7 1,161,710 - SM_b20936 0.59 +0.0 1,161,721 + SM_b20936 0.61 -0.1 1,161,722 - SM_b20936 0.61 +1.4 1,161,733 + SM_b20936 0.63 +2.5 1,161,733 + SM_b20936 0.63 -0.3 1,161,734 - SM_b20936 0.63 +0.0 1,161,739 - SM_b20936 0.64 -0.4 1,161,766 - SM_b20936 0.68 +0.0 1,161,766 - SM_b20936 0.68 -0.0 1,161,766 - SM_b20936 0.68 +0.2 1,161,776 + SM_b20936 0.70 -2.7 1,161,951 - +0.2 1,162,056 + -0.6 1,162,056 + +0.6 1,162,056 + -0.2 1,162,057 - +1.1 1,162,057 - -0.5 1,162,117 - +1.2 1,162,117 - +1.0 1,162,121 + +0.3 1,162,122 - -0.0 1,162,149 - -0.5 1,162,149 - -1.0 1,162,251 + SM_b20937 0.14 +0.1 1,162,251 + SM_b20937 0.14 +0.1 1,162,251 + SM_b20937 0.14 +0.7 1,162,252 - SM_b20937 0.14 -0.1 1,162,252 - SM_b20937 0.14 +0.4 1,162,252 - SM_b20937 0.14 -0.1 1,162,252 - SM_b20937 0.14 -2.1 1,162,597 + SM_b20937 0.33 +0.3 1,162,597 + SM_b20937 0.33 -1.9 1,162,598 - SM_b20937 0.33 +1.6 1,162,740 + SM_b20937 0.41 +1.3 1,162,740 + SM_b20937 0.41 -0.3 1,162,740 + SM_b20937 0.41 +1.0 1,162,741 - SM_b20937 0.41 -0.0 1,162,832 + SM_b20937 0.46 -0.4 1,162,833 - SM_b20937 0.46 +0.4 1,162,874 - SM_b20937 0.48 -1.2 1,162,899 + SM_b20937 0.50 -0.1 1,162,900 - SM_b20937 0.50 -0.4 1,162,953 + SM_b20937 0.53 -0.5 1,162,953 + SM_b20937 0.53 +1.1 1,162,953 + SM_b20937 0.53 +2.0 1,162,954 - SM_b20937 0.53 -0.3 1,162,954 - SM_b20937 0.53 +0.1 1,162,954 - SM_b20937 0.53 +0.3 1,162,954 - SM_b20937 0.53 +0.2 1,162,954 - SM_b20937 0.53 -0.8 1,163,206 - SM_b20937 0.67 +1.0 1,163,838 + -1.0 1,164,019 + SM_b20938 0.22 -1.2 1,164,020 - SM_b20938 0.22 +1.2 1,164,040 - SM_b20938 0.25 +1.0 1,164,040 - SM_b20938 0.25 -0.6 1,164,081 + SM_b20938 0.30 +1.1 1,164,081 + SM_b20938 0.30 +0.2 1,164,081 + SM_b20938 0.30 -2.0 1,164,081 + SM_b20938 0.30 +1.8 1,164,082 - SM_b20938 0.30 -2.2 1,164,087 + SM_b20938 0.31 -0.3 1,164,088 - SM_b20938 0.31 -0.5 1,164,120 - SM_b20938 0.36 -1.3 1,164,120 - SM_b20938 0.36 -1.2 1,164,323 + SM_b20938 0.63 -0.9 1,164,323 + SM_b20938 0.63 +1.3 1,164,324 - +1.0 1,164,324 - SM_b20938 0.63 +1.9 1,164,432 + SM_b20938 0.78 -0.5 1,164,603 - -2.0 1,164,677 + SM_b20939 0.24 +0.1 1,164,763 - SM_b20939 0.47 +0.5 1,164,764 + SM_b20939 0.48 -1.2 1,164,764 + SM_b20939 0.48 -0.4 1,164,764 + SM_b20939 0.48 +0.2 1,164,765 - -0.6 1,164,791 + SM_b20939 0.55 +0.3
Or see this region's nucleotide sequence