Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20763 and SM_b20764 are separated by 33 nucleotides SM_b20764 and SM_b20765 overlap by 4 nucleotides SM_b20765 and SM_b20766 are separated by 127 nucleotides
SM_b20763: SM_b20763 - phosphonate C-P lyase system protein PhnK, at 1,555,056 to 1,555,832
_b20763
SM_b20764: SM_b20764 - phosphonate uptake ABC transporter ATP-binding protein, at 1,555,866 to 1,556,573
_b20764
SM_b20765: SM_b20765 - acetyltransferase, at 1,556,570 to 1,557,184
_b20765
SM_b20766: SM_b20766 - transposase of insertion sequence ISRm22 protein, at 1,557,312 to 1,558,475
_b20766
Position (kb)
1556
1557
1558 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1555.858 kb on + strand at 1556.643 kb on - strand, within SM_b20765 at 1556.699 kb on + strand, within SM_b20765 at 1556.700 kb on - strand, within SM_b20765 at 1556.700 kb on - strand, within SM_b20765 at 1556.833 kb on + strand, within SM_b20765 at 1556.833 kb on + strand, within SM_b20765 at 1556.833 kb on + strand, within SM_b20765 at 1556.834 kb on - strand, within SM_b20765 at 1556.834 kb on - strand, within SM_b20765 at 1556.834 kb on - strand, within SM_b20765 at 1556.834 kb on - strand, within SM_b20765 at 1556.834 kb on - strand, within SM_b20765 at 1556.834 kb on - strand, within SM_b20765 at 1556.838 kb on - strand, within SM_b20765 at 1556.838 kb on - strand, within SM_b20765 at 1557.011 kb on + strand, within SM_b20765 at 1557.012 kb on - strand, within SM_b20765 at 1557.177 kb on - strand at 1557.178 kb on + strand at 1557.178 kb on + strand at 1557.178 kb on + strand at 1557.179 kb on - strand at 1557.179 kb on - strand at 1557.195 kb on + strand at 1557.196 kb on - strand at 1557.196 kb on - strand at 1557.196 kb on - strand at 1557.196 kb on - strand at 1557.200 kb on + strand at 1557.269 kb on - strand at 1557.269 kb on - strand at 1557.269 kb on - strand at 1557.269 kb on - strand at 1557.318 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,555,858 + +1.2 1,556,643 - SM_b20765 0.12 -0.5 1,556,699 + SM_b20765 0.21 -0.3 1,556,700 - SM_b20765 0.21 -0.9 1,556,700 - SM_b20765 0.21 -0.6 1,556,833 + SM_b20765 0.43 +1.0 1,556,833 + SM_b20765 0.43 -0.6 1,556,833 + SM_b20765 0.43 +0.2 1,556,834 - SM_b20765 0.43 -0.6 1,556,834 - SM_b20765 0.43 -0.2 1,556,834 - SM_b20765 0.43 -0.8 1,556,834 - SM_b20765 0.43 +0.3 1,556,834 - SM_b20765 0.43 -0.6 1,556,834 - SM_b20765 0.43 -0.6 1,556,838 - SM_b20765 0.44 -2.7 1,556,838 - SM_b20765 0.44 -0.6 1,557,011 + SM_b20765 0.72 +0.7 1,557,012 - SM_b20765 0.72 -0.4 1,557,177 - -2.5 1,557,178 + -0.6 1,557,178 + -3.1 1,557,178 + -0.5 1,557,179 - +0.5 1,557,179 - +0.4 1,557,195 + +1.0 1,557,196 - -1.6 1,557,196 - -1.8 1,557,196 - +2.0 1,557,196 - -0.1 1,557,200 + -0.6 1,557,269 - -0.5 1,557,269 - +0.2 1,557,269 - -0.0 1,557,269 - +0.7 1,557,318 - +0.8
Or see this region's nucleotide sequence