Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20698 and SM_b20699 overlap by 4 nucleotides SM_b20699 and SM_b20700 are separated by 86 nucleotides SM_b20700 and SM_b20701 are separated by 76 nucleotides
SM_b20698: SM_b20698 - transporter, at 1,498,701 to 1,500,353
_b20698
SM_b20699: SM_b20699 - protein secretion protein, at 1,500,350 to 1,501,447
_b20699
SM_b20700: SM_b20700 - hypothetical protein, at 1,501,534 to 1,501,947
_b20700
SM_b20701: SM_b20701 - hypothetical protein, at 1,502,024 to 1,502,776
_b20701
Position (kb)
1500
1501
1502 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1499.687 kb on - strand, within SM_b20698 at 1500.170 kb on - strand, within SM_b20698 at 1500.208 kb on + strand at 1500.208 kb on + strand at 1500.209 kb on - strand at 1500.209 kb on - strand at 1500.209 kb on - strand at 1500.209 kb on - strand at 1500.224 kb on + strand at 1500.286 kb on - strand at 1500.318 kb on + strand at 1500.318 kb on + strand at 1500.319 kb on - strand at 1500.565 kb on - strand, within SM_b20699 at 1500.644 kb on + strand, within SM_b20699 at 1500.644 kb on + strand, within SM_b20699 at 1500.645 kb on - strand, within SM_b20699 at 1500.645 kb on - strand, within SM_b20699 at 1500.645 kb on - strand, within SM_b20699 at 1500.665 kb on - strand, within SM_b20699 at 1500.981 kb on + strand, within SM_b20699 at 1501.247 kb on - strand, within SM_b20699 at 1501.263 kb on + strand, within SM_b20699 at 1501.264 kb on - strand, within SM_b20699 at 1501.631 kb on - strand, within SM_b20700 at 1501.631 kb on - strand, within SM_b20700 at 1501.631 kb on - strand, within SM_b20700 at 1501.631 kb on - strand, within SM_b20700 at 1501.679 kb on + strand, within SM_b20700 at 1501.680 kb on - strand, within SM_b20700 at 1501.680 kb on - strand, within SM_b20700 at 1501.680 kb on - strand, within SM_b20700 at 1501.740 kb on - strand at 1501.740 kb on - strand, within SM_b20700 at 1501.740 kb on - strand, within SM_b20700 at 1501.740 kb on - strand, within SM_b20700 at 1501.793 kb on + strand, within SM_b20700 at 1501.794 kb on - strand, within SM_b20700 at 1501.853 kb on - strand, within SM_b20700 at 1502.404 kb on - strand, within SM_b20701
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,499,687 - SM_b20698 0.60 -0.5 1,500,170 - SM_b20698 0.89 +0.2 1,500,208 + -0.5 1,500,208 + +0.3 1,500,209 - -1.0 1,500,209 - -0.0 1,500,209 - +0.0 1,500,209 - +0.5 1,500,224 + -0.4 1,500,286 - +0.1 1,500,318 + -0.1 1,500,318 + -0.6 1,500,319 - -1.0 1,500,565 - SM_b20699 0.20 +0.4 1,500,644 + SM_b20699 0.27 -0.3 1,500,644 + SM_b20699 0.27 -0.1 1,500,645 - SM_b20699 0.27 -5.5 1,500,645 - SM_b20699 0.27 +0.2 1,500,645 - SM_b20699 0.27 -0.7 1,500,665 - SM_b20699 0.29 -0.9 1,500,981 + SM_b20699 0.57 -0.7 1,501,247 - SM_b20699 0.82 -2.3 1,501,263 + SM_b20699 0.83 -0.1 1,501,264 - SM_b20699 0.83 +0.1 1,501,631 - SM_b20700 0.23 -0.5 1,501,631 - SM_b20700 0.23 +0.0 1,501,631 - SM_b20700 0.23 +0.3 1,501,631 - SM_b20700 0.23 -0.2 1,501,679 + SM_b20700 0.35 +2.6 1,501,680 - SM_b20700 0.35 +0.4 1,501,680 - SM_b20700 0.35 +0.1 1,501,680 - SM_b20700 0.35 -0.2 1,501,740 - +2.6 1,501,740 - SM_b20700 0.50 -0.7 1,501,740 - SM_b20700 0.50 -0.8 1,501,740 - SM_b20700 0.50 -0.0 1,501,793 + SM_b20700 0.63 -0.2 1,501,794 - SM_b20700 0.63 -0.9 1,501,853 - SM_b20700 0.77 -0.4 1,502,404 - SM_b20701 0.50 -0.7
Or see this region's nucleotide sequence