Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20654 and SM_b20655 are separated by 193 nucleotides SM_b20655 and SM_b20656 are separated by 270 nucleotides
SM_b20654: SM_b20654 - hypothetical protein, at 1,455,985 to 1,456,380
_b20654
SM_b20655: SM_b20655 - hypothetical protein, at 1,456,574 to 1,457,050
_b20655
SM_b20656: SM_b20656 - oxidoreductase, at 1,457,321 to 1,458,190
_b20656
Position (kb)
1456
1457
1458 Strain fitness (log2 ratio)
-2
-1
0
1 at 1455.675 kb on - strand at 1455.747 kb on + strand at 1455.747 kb on + strand at 1455.747 kb on + strand at 1455.748 kb on - strand at 1455.748 kb on - strand at 1455.792 kb on + strand at 1455.861 kb on + strand at 1455.861 kb on + strand at 1455.861 kb on + strand at 1455.861 kb on + strand at 1455.861 kb on + strand at 1455.861 kb on + strand at 1455.862 kb on - strand at 1455.862 kb on - strand at 1455.862 kb on - strand at 1455.862 kb on - strand at 1455.904 kb on + strand at 1455.904 kb on + strand at 1455.985 kb on - strand at 1456.007 kb on + strand at 1456.048 kb on - strand, within SM_b20654 at 1456.048 kb on - strand, within SM_b20654 at 1456.094 kb on + strand at 1456.095 kb on - strand, within SM_b20654 at 1456.125 kb on + strand, within SM_b20654 at 1456.125 kb on + strand, within SM_b20654 at 1456.125 kb on + strand, within SM_b20654 at 1456.232 kb on + strand, within SM_b20654 at 1456.233 kb on - strand, within SM_b20654 at 1456.330 kb on - strand, within SM_b20654 at 1456.371 kb on + strand at 1456.372 kb on - strand at 1456.378 kb on + strand at 1456.416 kb on + strand at 1456.417 kb on - strand at 1456.417 kb on - strand at 1456.487 kb on + strand at 1456.585 kb on + strand at 1456.635 kb on - strand, within SM_b20655 at 1456.635 kb on - strand, within SM_b20655 at 1456.797 kb on - strand, within SM_b20655 at 1457.008 kb on - strand at 1457.008 kb on - strand at 1457.049 kb on - strand at 1457.054 kb on + strand at 1457.108 kb on - strand at 1457.320 kb on + strand at 1457.320 kb on + strand at 1457.321 kb on - strand at 1457.321 kb on - strand at 1457.457 kb on + strand, within SM_b20656 at 1457.667 kb on - strand, within SM_b20656 at 1457.667 kb on - strand, within SM_b20656 at 1457.771 kb on + strand, within SM_b20656 at 1457.772 kb on - strand, within SM_b20656 at 1457.861 kb on + strand, within SM_b20656 at 1457.862 kb on - strand, within SM_b20656 at 1457.862 kb on - strand, within SM_b20656 at 1457.862 kb on - strand, within SM_b20656 at 1457.867 kb on - strand, within SM_b20656 at 1457.867 kb on - strand, within SM_b20656
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,455,675 - -0.0 1,455,747 + -0.2 1,455,747 + +0.1 1,455,747 + -0.5 1,455,748 - +1.1 1,455,748 - +0.1 1,455,792 + +0.9 1,455,861 + -1.0 1,455,861 + +0.7 1,455,861 + +0.5 1,455,861 + +1.0 1,455,861 + +0.7 1,455,861 + -0.6 1,455,862 - +0.8 1,455,862 - -0.0 1,455,862 - -2.7 1,455,862 - +0.1 1,455,904 + -0.6 1,455,904 + +0.3 1,455,985 - +0.8 1,456,007 + -0.6 1,456,048 - SM_b20654 0.16 -0.6 1,456,048 - SM_b20654 0.16 -0.0 1,456,094 + -2.4 1,456,095 - SM_b20654 0.28 +0.4 1,456,125 + SM_b20654 0.35 +1.2 1,456,125 + SM_b20654 0.35 +0.2 1,456,125 + SM_b20654 0.35 -1.8 1,456,232 + SM_b20654 0.62 -0.1 1,456,233 - SM_b20654 0.63 +0.3 1,456,330 - SM_b20654 0.87 +0.3 1,456,371 + +0.4 1,456,372 - +0.2 1,456,378 + +0.2 1,456,416 + +0.7 1,456,417 - -0.0 1,456,417 - +0.7 1,456,487 + +0.0 1,456,585 + +0.5 1,456,635 - SM_b20655 0.13 -0.3 1,456,635 - SM_b20655 0.13 -2.2 1,456,797 - SM_b20655 0.47 -1.4 1,457,008 - +0.1 1,457,008 - -2.2 1,457,049 - -0.6 1,457,054 + -1.1 1,457,108 - -0.4 1,457,320 + +0.0 1,457,320 + -0.1 1,457,321 - -0.2 1,457,321 - +0.3 1,457,457 + SM_b20656 0.16 -1.3 1,457,667 - SM_b20656 0.40 +0.7 1,457,667 - SM_b20656 0.40 -0.2 1,457,771 + SM_b20656 0.52 +1.1 1,457,772 - SM_b20656 0.52 -0.0 1,457,861 + SM_b20656 0.62 +1.4 1,457,862 - SM_b20656 0.62 -1.0 1,457,862 - SM_b20656 0.62 +1.0 1,457,862 - SM_b20656 0.62 +0.2 1,457,867 - SM_b20656 0.63 +0.6 1,457,867 - SM_b20656 0.63 -0.0
Or see this region's nucleotide sequence