Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20605 and SM_b20606 are separated by 212 nucleotides SM_b20606 and SM_b20607 overlap by 4 nucleotides SM_b20607 and SM_b20608 are separated by 32 nucleotides
SM_b20605: SM_b20605 - branched-chain amino acid ABC transporter substrate-binding protein, at 1,619,075 to 1,620,367
_b20605
SM_b20606: SM_b20606 - hypothetical protein, at 1,620,580 to 1,621,029
_b20606
SM_b20607: SM_b20607 - hypothetical protein, at 1,621,026 to 1,621,490
_b20607
SM_b20608: SM_b20608 - ArsR family transcriptional regulator, at 1,621,523 to 1,621,861
_b20608
Position (kb)
1620
1621
1622 Strain fitness (log2 ratio)
-2
-1
0
1 at 1619.799 kb on + strand, within SM_b20605 at 1619.808 kb on + strand, within SM_b20605 at 1619.809 kb on - strand, within SM_b20605 at 1619.809 kb on - strand, within SM_b20605 at 1619.842 kb on - strand, within SM_b20605 at 1619.847 kb on + strand, within SM_b20605 at 1619.848 kb on - strand, within SM_b20605 at 1619.943 kb on + strand, within SM_b20605 at 1619.943 kb on + strand, within SM_b20605 at 1619.944 kb on - strand, within SM_b20605 at 1619.976 kb on + strand, within SM_b20605 at 1619.988 kb on + strand, within SM_b20605 at 1619.989 kb on - strand, within SM_b20605 at 1620.153 kb on - strand, within SM_b20605 at 1620.316 kb on + strand at 1620.362 kb on - strand at 1620.465 kb on + strand at 1620.466 kb on - strand at 1620.466 kb on - strand at 1620.476 kb on - strand at 1620.480 kb on - strand at 1620.588 kb on - strand at 1620.639 kb on - strand, within SM_b20606 at 1621.016 kb on + strand at 1621.016 kb on + strand at 1621.057 kb on + strand at 1621.058 kb on - strand at 1621.059 kb on - strand at 1621.262 kb on - strand, within SM_b20607 at 1621.262 kb on - strand, within SM_b20607 at 1621.279 kb on + strand, within SM_b20607 at 1621.280 kb on - strand, within SM_b20607 at 1621.280 kb on - strand, within SM_b20607 at 1621.454 kb on + strand at 1621.454 kb on + strand at 1621.455 kb on - strand at 1621.455 kb on - strand at 1621.566 kb on + strand, within SM_b20608 at 1621.566 kb on + strand, within SM_b20608 at 1621.566 kb on + strand, within SM_b20608 at 1621.566 kb on + strand, within SM_b20608 at 1621.567 kb on - strand, within SM_b20608 at 1621.567 kb on - strand, within SM_b20608 at 1621.608 kb on + strand, within SM_b20608 at 1621.713 kb on - strand, within SM_b20608
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 1,619,799 + SM_b20605 0.56 -1.8 1,619,808 + SM_b20605 0.57 +0.8 1,619,809 - SM_b20605 0.57 -0.7 1,619,809 - SM_b20605 0.57 +0.1 1,619,842 - SM_b20605 0.59 -0.0 1,619,847 + SM_b20605 0.60 -0.9 1,619,848 - SM_b20605 0.60 -0.2 1,619,943 + SM_b20605 0.67 +1.1 1,619,943 + SM_b20605 0.67 -0.2 1,619,944 - SM_b20605 0.67 -1.2 1,619,976 + SM_b20605 0.70 -1.8 1,619,988 + SM_b20605 0.71 -0.2 1,619,989 - SM_b20605 0.71 +0.3 1,620,153 - SM_b20605 0.83 -0.2 1,620,316 + +0.2 1,620,362 - +0.8 1,620,465 + +0.4 1,620,466 - -0.5 1,620,466 - -0.3 1,620,476 - +0.8 1,620,480 - +0.6 1,620,588 - -0.3 1,620,639 - SM_b20606 0.13 -0.1 1,621,016 + -0.2 1,621,016 + +1.1 1,621,057 + -0.0 1,621,058 - -0.4 1,621,059 - +0.9 1,621,262 - SM_b20607 0.51 +1.4 1,621,262 - SM_b20607 0.51 +0.6 1,621,279 + SM_b20607 0.54 -0.5 1,621,280 - SM_b20607 0.55 +1.0 1,621,280 - SM_b20607 0.55 +0.3 1,621,454 + +0.5 1,621,454 + -0.7 1,621,455 - -1.0 1,621,455 - -0.5 1,621,566 + SM_b20608 0.13 +0.3 1,621,566 + SM_b20608 0.13 -0.1 1,621,566 + SM_b20608 0.13 +1.0 1,621,566 + SM_b20608 0.13 -0.9 1,621,567 - SM_b20608 0.13 -0.2 1,621,567 - SM_b20608 0.13 +1.7 1,621,608 + SM_b20608 0.25 -0.8 1,621,713 - SM_b20608 0.56 +0.1
Or see this region's nucleotide sequence