Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20478 and SM_b20479 overlap by 4 nucleotides SM_b20479 and SM_b20480 are separated by 6 nucleotides SM_b20480 and SM_b20481 are separated by 123 nucleotides
SM_b20478: SM_b20478 - dipeptide ABC transporter permease and ATP-binding protein, at 491,410 to 493,212
_b20478
SM_b20479: SM_b20479 - dipeptide ABC transporter ATP-binding protein, at 493,209 to 494,006
_b20479
SM_b20480: SM_b20480 - transcriptional regulator, at 494,013 to 494,795
_b20480
SM_b20481: SM_b20481 - asparagine synthetase (glutamine amidotransferase) protein, at 494,919 to 496,694
_b20481
Position (kb) 493
494
495 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 492.584 kb on + strand, within SM_b20478 at 492.585 kb on - strand, within SM_b20478 at 492.637 kb on + strand, within SM_b20478 at 492.637 kb on + strand, within SM_b20478 at 492.637 kb on + strand, within SM_b20478 at 492.638 kb on - strand, within SM_b20478 at 492.677 kb on - strand, within SM_b20478 at 492.808 kb on + strand, within SM_b20478 at 492.809 kb on - strand, within SM_b20478 at 493.082 kb on + strand at 493.106 kb on - strand at 493.295 kb on - strand, within SM_b20479 at 493.295 kb on - strand, within SM_b20479 at 493.497 kb on + strand, within SM_b20479 at 493.497 kb on + strand, within SM_b20479 at 493.497 kb on + strand, within SM_b20479 at 493.497 kb on + strand, within SM_b20479 at 493.497 kb on + strand, within SM_b20479 at 493.498 kb on - strand, within SM_b20479 at 493.498 kb on - strand, within SM_b20479 at 493.498 kb on - strand, within SM_b20479 at 493.498 kb on - strand, within SM_b20479 at 493.498 kb on - strand, within SM_b20479 at 493.649 kb on + strand, within SM_b20479 at 493.833 kb on + strand, within SM_b20479 at 493.833 kb on + strand, within SM_b20479 at 493.834 kb on - strand, within SM_b20479 at 493.834 kb on - strand, within SM_b20479 at 493.896 kb on + strand, within SM_b20479 at 493.897 kb on - strand, within SM_b20479 at 493.959 kb on + strand at 493.959 kb on + strand at 493.960 kb on - strand at 493.962 kb on - strand at 494.084 kb on + strand at 494.085 kb on - strand at 494.128 kb on - strand, within SM_b20480 at 494.215 kb on + strand, within SM_b20480 at 494.215 kb on + strand, within SM_b20480 at 494.368 kb on + strand, within SM_b20480 at 494.369 kb on - strand, within SM_b20480 at 494.369 kb on - strand, within SM_b20480 at 494.369 kb on - strand, within SM_b20480 at 494.370 kb on + strand, within SM_b20480 at 494.370 kb on + strand, within SM_b20480 at 494.370 kb on + strand, within SM_b20480 at 494.370 kb on + strand, within SM_b20480 at 494.370 kb on + strand, within SM_b20480 at 494.370 kb on + strand, within SM_b20480 at 494.371 kb on - strand, within SM_b20480 at 494.371 kb on - strand, within SM_b20480 at 494.371 kb on - strand, within SM_b20480 at 494.371 kb on - strand, within SM_b20480 at 494.371 kb on - strand, within SM_b20480 at 494.469 kb on + strand, within SM_b20480 at 494.470 kb on - strand, within SM_b20480 at 494.632 kb on - strand, within SM_b20480 at 494.744 kb on + strand at 494.744 kb on + strand at 494.745 kb on - strand at 494.764 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 492,584 + SM_b20478 0.65 +0.3 492,585 - SM_b20478 0.65 +0.0 492,637 + SM_b20478 0.68 +0.3 492,637 + SM_b20478 0.68 +2.7 492,637 + SM_b20478 0.68 -1.0 492,638 - SM_b20478 0.68 +0.6 492,677 - SM_b20478 0.70 -0.1 492,808 + SM_b20478 0.78 +0.5 492,809 - SM_b20478 0.78 +0.2 493,082 + +0.3 493,106 - +0.4 493,295 - SM_b20479 0.11 -1.2 493,295 - SM_b20479 0.11 +1.9 493,497 + SM_b20479 0.36 +0.1 493,497 + SM_b20479 0.36 +0.3 493,497 + SM_b20479 0.36 +3.0 493,497 + SM_b20479 0.36 +0.1 493,497 + SM_b20479 0.36 +0.4 493,498 - SM_b20479 0.36 +0.7 493,498 - SM_b20479 0.36 +0.7 493,498 - SM_b20479 0.36 +1.6 493,498 - SM_b20479 0.36 +0.5 493,498 - SM_b20479 0.36 +0.6 493,649 + SM_b20479 0.55 +1.5 493,833 + SM_b20479 0.78 -0.8 493,833 + SM_b20479 0.78 +0.4 493,834 - SM_b20479 0.78 -1.3 493,834 - SM_b20479 0.78 -0.2 493,896 + SM_b20479 0.86 +0.2 493,897 - SM_b20479 0.86 +0.6 493,959 + -0.4 493,959 + -0.4 493,960 - +0.1 493,962 - -0.4 494,084 + -1.0 494,085 - +1.0 494,128 - SM_b20480 0.15 -0.4 494,215 + SM_b20480 0.26 -0.1 494,215 + SM_b20480 0.26 -2.9 494,368 + SM_b20480 0.45 -0.9 494,369 - SM_b20480 0.45 +0.1 494,369 - SM_b20480 0.45 -1.0 494,369 - SM_b20480 0.45 +1.0 494,370 + SM_b20480 0.46 -0.4 494,370 + SM_b20480 0.46 +0.4 494,370 + SM_b20480 0.46 +1.8 494,370 + SM_b20480 0.46 +0.1 494,370 + SM_b20480 0.46 +0.4 494,370 + SM_b20480 0.46 -0.9 494,371 - SM_b20480 0.46 +0.6 494,371 - SM_b20480 0.46 +0.0 494,371 - SM_b20480 0.46 -1.0 494,371 - SM_b20480 0.46 +1.9 494,371 - SM_b20480 0.46 -0.1 494,469 + SM_b20480 0.58 -1.8 494,470 - SM_b20480 0.58 -1.6 494,632 - SM_b20480 0.79 +0.5 494,744 + -0.2 494,744 + -0.6 494,745 - -1.4 494,764 - -0.8
Or see this region's nucleotide sequence