Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20470 and SM_b20471 are separated by 30 nucleotides SM_b20471 and SM_b20472 are separated by 13 nucleotides SM_b20472 and SM_b20473 are separated by 314 nucleotides
SM_b20470: SM_b20470 - hypothetical protein, at 483,955 to 484,386
_b20470
SM_b20471: SM_b20471 - hypothetical protein, at 484,417 to 484,566
_b20471
SM_b20472: SM_b20472 - nodulation protein, at 484,580 to 486,412
_b20472
SM_b20473: SM_b20473 - hypothetical protein, at 486,727 to 487,224
_b20473
Position (kb) 484
485
486
487 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 483.626 kb on + strand at 483.709 kb on + strand at 483.823 kb on - strand at 483.823 kb on - strand at 483.852 kb on + strand at 484.023 kb on + strand, within SM_b20470 at 484.024 kb on - strand, within SM_b20470 at 484.047 kb on + strand, within SM_b20470 at 484.083 kb on - strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.237 kb on + strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.257 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.328 kb on - strand, within SM_b20470 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.447 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.585 kb on + strand at 484.585 kb on + strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.590 kb on + strand at 484.595 kb on - strand at 484.608 kb on - strand at 484.721 kb on + strand at 484.722 kb on - strand at 484.722 kb on - strand at 484.776 kb on - strand, within SM_b20472 at 484.776 kb on - strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.914 kb on - strand, within SM_b20472 at 484.917 kb on + strand, within SM_b20472 at 484.918 kb on - strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.104 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.157 kb on - strand, within SM_b20472 at 485.159 kb on + strand, within SM_b20472 at 485.160 kb on - strand, within SM_b20472 at 485.189 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.192 kb on - strand, within SM_b20472 at 485.214 kb on - strand, within SM_b20472 at 485.684 kb on + strand, within SM_b20472 at 485.685 kb on - strand, within SM_b20472 at 485.748 kb on - strand, within SM_b20472 at 486.012 kb on - strand, within SM_b20472 at 486.012 kb on - strand, within SM_b20472 at 486.013 kb on + strand, within SM_b20472 at 486.013 kb on + strand, within SM_b20472 at 486.013 kb on + strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.033 kb on + strand, within SM_b20472 at 486.033 kb on + strand, within SM_b20472 at 486.034 kb on - strand, within SM_b20472 at 486.087 kb on + strand, within SM_b20472 at 486.087 kb on + strand, within SM_b20472 at 486.088 kb on - strand, within SM_b20472 at 486.141 kb on - strand, within SM_b20472 at 486.199 kb on - strand, within SM_b20472 at 486.199 kb on - strand, within SM_b20472 at 486.199 kb on - strand, within SM_b20472 at 486.231 kb on + strand at 486.273 kb on + strand at 486.273 kb on + strand at 486.274 kb on - strand at 486.386 kb on + strand at 486.386 kb on + strand at 486.427 kb on - strand at 486.442 kb on - strand at 486.442 kb on - strand at 486.705 kb on - strand at 486.865 kb on + strand, within SM_b20473 at 486.925 kb on + strand, within SM_b20473 at 486.926 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.104 kb on + strand, within SM_b20473 at 487.104 kb on + strand, within SM_b20473 at 487.105 kb on - strand, within SM_b20473 at 487.181 kb on + strand at 487.181 kb on + strand at 487.261 kb on + strand at 487.262 kb on - strand at 487.262 kb on - strand at 487.262 kb on - strand at 487.262 kb on - strand at 487.268 kb on - strand at 487.270 kb on + strand at 487.270 kb on + strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.350 kb on + strand at 487.351 kb on - strand at 487.361 kb on + strand at 487.362 kb on - strand at 487.376 kb on - strand at 487.387 kb on + strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.389 kb on + strand at 487.389 kb on + strand at 487.390 kb on - strand at 487.390 kb on - strand at 487.391 kb on + strand at 487.392 kb on - strand at 487.392 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 483,626 + +1.3 483,709 + +0.5 483,823 - -0.0 483,823 - -0.5 483,852 + +0.1 484,023 + SM_b20470 0.16 +1.0 484,024 - SM_b20470 0.16 +0.8 484,047 + SM_b20470 0.21 +0.7 484,083 - SM_b20470 0.30 -0.4 484,193 + SM_b20470 0.55 -0.2 484,193 + SM_b20470 0.55 +0.6 484,194 - SM_b20470 0.55 +1.0 484,194 - SM_b20470 0.55 -0.1 484,194 - SM_b20470 0.55 -1.1 484,198 - SM_b20470 0.56 +0.9 484,198 - SM_b20470 0.56 -0.1 484,198 - SM_b20470 0.56 -1.0 484,198 - SM_b20470 0.56 -0.3 484,198 - SM_b20470 0.56 -0.5 484,237 + SM_b20470 0.65 +0.4 484,238 - SM_b20470 0.66 -1.1 484,238 - SM_b20470 0.66 -0.2 484,257 + SM_b20470 0.70 -1.1 484,327 + SM_b20470 0.86 -0.1 484,327 + SM_b20470 0.86 +0.1 484,327 + SM_b20470 0.86 +1.6 484,328 - SM_b20470 0.86 -2.8 484,444 + SM_b20471 0.18 +0.2 484,444 + SM_b20471 0.18 +0.5 484,444 + -1.6 484,444 + SM_b20471 0.18 +0.2 484,444 + SM_b20471 0.18 +0.1 484,445 - SM_b20471 0.19 -1.3 484,445 - SM_b20471 0.19 -1.1 484,445 - SM_b20471 0.19 +2.3 484,445 - SM_b20471 0.19 +0.2 484,445 - SM_b20471 0.19 +0.3 484,447 - -0.0 484,553 - +1.5 484,553 - +1.2 484,553 - -0.6 484,585 + -0.7 484,585 + +0.2 484,586 - -0.9 484,586 - -0.5 484,586 - -1.3 484,586 - +1.8 484,586 - -1.0 484,590 + +0.3 484,595 - -0.8 484,608 - -2.3 484,721 + +0.7 484,722 - +0.4 484,722 - +1.5 484,776 - SM_b20472 0.11 +0.1 484,776 - SM_b20472 0.11 -0.5 484,817 + SM_b20472 0.13 +1.1 484,817 + SM_b20472 0.13 +0.4 484,818 - SM_b20472 0.13 +1.3 484,818 - SM_b20472 0.13 +1.0 484,914 - SM_b20472 0.18 -0.3 484,917 + SM_b20472 0.18 +0.7 484,918 - SM_b20472 0.18 +0.4 485,100 + SM_b20472 0.28 +0.2 485,100 + SM_b20472 0.28 -0.1 485,101 - SM_b20472 0.28 +0.6 485,101 - SM_b20472 0.28 +1.0 485,104 + SM_b20472 0.29 -0.7 485,156 + SM_b20472 0.31 -1.3 485,156 + SM_b20472 0.31 -1.0 485,157 - SM_b20472 0.31 +1.5 485,159 + SM_b20472 0.32 +0.3 485,160 - SM_b20472 0.32 +1.0 485,189 + SM_b20472 0.33 +0.4 485,191 + SM_b20472 0.33 +0.6 485,191 + SM_b20472 0.33 +1.1 485,192 - SM_b20472 0.33 -0.1 485,214 - SM_b20472 0.35 +0.5 485,684 + SM_b20472 0.60 +1.3 485,685 - SM_b20472 0.60 +0.8 485,748 - SM_b20472 0.64 -1.9 486,012 - SM_b20472 0.78 -0.2 486,012 - SM_b20472 0.78 +0.1 486,013 + SM_b20472 0.78 +0.1 486,013 + SM_b20472 0.78 +0.8 486,013 + SM_b20472 0.78 -2.0 486,014 - SM_b20472 0.78 +0.6 486,014 - SM_b20472 0.78 +0.3 486,014 - SM_b20472 0.78 +0.2 486,014 - SM_b20472 0.78 +0.3 486,014 - SM_b20472 0.78 +1.8 486,014 - SM_b20472 0.78 +0.2 486,033 + SM_b20472 0.79 +1.3 486,033 + SM_b20472 0.79 -1.5 486,034 - SM_b20472 0.79 +0.3 486,087 + SM_b20472 0.82 -1.8 486,087 + SM_b20472 0.82 -1.2 486,088 - SM_b20472 0.82 +0.2 486,141 - SM_b20472 0.85 +0.9 486,199 - SM_b20472 0.88 -0.0 486,199 - SM_b20472 0.88 +0.5 486,199 - SM_b20472 0.88 +1.0 486,231 + +1.0 486,273 + -1.4 486,273 + +0.6 486,274 - +0.6 486,386 + -0.9 486,386 + +0.2 486,427 - +0.6 486,442 - -0.1 486,442 - +0.6 486,705 - +0.7 486,865 + SM_b20473 0.28 -0.2 486,925 + SM_b20473 0.40 +0.4 486,926 - SM_b20473 0.40 +0.2 487,032 - SM_b20473 0.61 -1.7 487,032 - SM_b20473 0.61 +0.9 487,032 - SM_b20473 0.61 +0.4 487,032 - SM_b20473 0.61 +0.7 487,104 + SM_b20473 0.76 -0.5 487,104 + SM_b20473 0.76 +1.3 487,105 - SM_b20473 0.76 +0.6 487,181 + +0.4 487,181 + +0.6 487,261 + -0.8 487,262 - +0.2 487,262 - -1.5 487,262 - +0.3 487,262 - +0.4 487,268 - -0.2 487,270 + +1.0 487,270 + +1.4 487,271 - +0.7 487,271 - -0.2 487,271 - -0.5 487,350 + +0.1 487,351 - -0.0 487,361 + -0.1 487,362 - -0.0 487,376 - +0.2 487,387 + +0.0 487,388 - -0.0 487,388 - +0.3 487,388 - -0.0 487,388 - +0.6 487,388 - +0.0 487,389 + -1.0 487,389 + +0.2 487,390 - -0.7 487,390 - +1.1 487,391 + +1.0 487,392 - -0.6 487,392 - +0.9
Or see this region's nucleotide sequence