Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20441 and SM_b20442 are separated by 39 nucleotides SM_b20442 and SM_b20443 are separated by 67 nucleotides SM_b20443 and SM_b20444 are separated by 5 nucleotides
SM_b20441: SM_b20441 - transcriptional regulator, at 452,507 to 453,247
_b20441
SM_b20442: SM_b20442 - substrate-binding protein, at 453,287 to 454,261
_b20442
SM_b20443: SM_b20443 - permease, at 454,329 to 454,901
_b20443
SM_b20444: SM_b20444 - hypothetical protein, at 454,907 to 456,313
_b20444
Position (kb) 453
454
455 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 452.345 kb on - strand at 452.441 kb on + strand at 452.441 kb on + strand at 452.447 kb on - strand at 452.670 kb on + strand, within SM_b20441 at 452.670 kb on + strand, within SM_b20441 at 452.670 kb on + strand, within SM_b20441 at 452.671 kb on - strand, within SM_b20441 at 452.720 kb on + strand, within SM_b20441 at 452.720 kb on + strand, within SM_b20441 at 452.720 kb on + strand, within SM_b20441 at 452.721 kb on - strand, within SM_b20441 at 452.721 kb on - strand, within SM_b20441 at 452.721 kb on - strand, within SM_b20441 at 452.721 kb on - strand, within SM_b20441 at 452.721 kb on - strand, within SM_b20441 at 452.721 kb on - strand, within SM_b20441 at 452.857 kb on + strand, within SM_b20441 at 452.858 kb on - strand, within SM_b20441 at 452.858 kb on - strand, within SM_b20441 at 453.044 kb on + strand, within SM_b20441 at 453.044 kb on + strand, within SM_b20441 at 453.386 kb on + strand, within SM_b20442 at 453.387 kb on - strand, within SM_b20442 at 453.461 kb on + strand, within SM_b20442 at 453.461 kb on + strand, within SM_b20442 at 453.461 kb on + strand, within SM_b20442 at 453.462 kb on - strand, within SM_b20442 at 453.542 kb on - strand, within SM_b20442 at 453.599 kb on + strand, within SM_b20442 at 453.600 kb on - strand, within SM_b20442 at 453.610 kb on + strand, within SM_b20442 at 453.610 kb on + strand, within SM_b20442 at 453.610 kb on + strand, within SM_b20442 at 453.611 kb on - strand, within SM_b20442 at 453.643 kb on + strand, within SM_b20442 at 453.657 kb on + strand, within SM_b20442 at 453.658 kb on - strand, within SM_b20442 at 453.680 kb on + strand, within SM_b20442 at 453.680 kb on + strand, within SM_b20442 at 453.681 kb on - strand, within SM_b20442 at 453.719 kb on + strand, within SM_b20442 at 453.719 kb on + strand, within SM_b20442 at 453.720 kb on - strand, within SM_b20442 at 453.720 kb on - strand, within SM_b20442 at 453.722 kb on + strand, within SM_b20442 at 453.796 kb on - strand, within SM_b20442 at 453.812 kb on + strand, within SM_b20442 at 453.872 kb on + strand, within SM_b20442 at 453.873 kb on - strand, within SM_b20442 at 453.873 kb on - strand, within SM_b20442 at 453.962 kb on - strand, within SM_b20442 at 453.962 kb on - strand, within SM_b20442 at 454.416 kb on + strand, within SM_b20443 at 454.417 kb on - strand, within SM_b20443 at 454.417 kb on - strand, within SM_b20443 at 454.495 kb on - strand, within SM_b20443 at 454.513 kb on - strand, within SM_b20443 at 454.617 kb on + strand, within SM_b20443 at 454.617 kb on + strand, within SM_b20443 at 454.617 kb on + strand at 454.617 kb on + strand, within SM_b20443 at 454.618 kb on - strand, within SM_b20443 at 454.618 kb on - strand, within SM_b20443 at 454.618 kb on - strand, within SM_b20443 at 454.618 kb on - strand, within SM_b20443 at 454.618 kb on - strand, within SM_b20443 at 454.624 kb on - strand, within SM_b20443 at 454.693 kb on - strand, within SM_b20443 at 454.716 kb on + strand, within SM_b20443 at 454.716 kb on + strand, within SM_b20443 at 454.753 kb on + strand, within SM_b20443 at 454.779 kb on + strand, within SM_b20443 at 454.780 kb on - strand, within SM_b20443 at 454.780 kb on - strand, within SM_b20443 at 454.854 kb on + strand at 454.935 kb on + strand at 454.936 kb on - strand at 454.936 kb on - strand at 454.991 kb on + strand at 455.003 kb on + strand at 455.004 kb on - strand at 455.135 kb on + strand, within SM_b20444 at 455.136 kb on - strand, within SM_b20444
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 452,345 - +0.5 452,441 + +0.2 452,441 + +0.0 452,447 - +0.9 452,670 + SM_b20441 0.22 +0.4 452,670 + SM_b20441 0.22 +0.1 452,670 + SM_b20441 0.22 -2.2 452,671 - SM_b20441 0.22 +0.9 452,720 + SM_b20441 0.29 -0.6 452,720 + SM_b20441 0.29 +0.1 452,720 + SM_b20441 0.29 +0.0 452,721 - SM_b20441 0.29 -1.0 452,721 - SM_b20441 0.29 -0.9 452,721 - SM_b20441 0.29 -0.8 452,721 - SM_b20441 0.29 +0.9 452,721 - SM_b20441 0.29 +0.1 452,721 - SM_b20441 0.29 -0.7 452,857 + SM_b20441 0.47 -0.0 452,858 - SM_b20441 0.47 -0.6 452,858 - SM_b20441 0.47 +1.1 453,044 + SM_b20441 0.72 -0.2 453,044 + SM_b20441 0.72 -0.8 453,386 + SM_b20442 0.10 -0.6 453,387 - SM_b20442 0.10 +0.7 453,461 + SM_b20442 0.18 -2.7 453,461 + SM_b20442 0.18 +0.4 453,461 + SM_b20442 0.18 -0.6 453,462 - SM_b20442 0.18 -0.0 453,542 - SM_b20442 0.26 +0.2 453,599 + SM_b20442 0.32 +0.3 453,600 - SM_b20442 0.32 +0.4 453,610 + SM_b20442 0.33 -0.6 453,610 + SM_b20442 0.33 -0.3 453,610 + SM_b20442 0.33 +0.1 453,611 - SM_b20442 0.33 +1.7 453,643 + SM_b20442 0.37 +0.4 453,657 + SM_b20442 0.38 +1.2 453,658 - SM_b20442 0.38 +0.4 453,680 + SM_b20442 0.40 +0.5 453,680 + SM_b20442 0.40 +0.7 453,681 - SM_b20442 0.40 +0.9 453,719 + SM_b20442 0.44 +0.2 453,719 + SM_b20442 0.44 +0.5 453,720 - SM_b20442 0.44 +0.4 453,720 - SM_b20442 0.44 -0.8 453,722 + SM_b20442 0.45 +0.6 453,796 - SM_b20442 0.52 -0.2 453,812 + SM_b20442 0.54 -0.7 453,872 + SM_b20442 0.60 -2.7 453,873 - SM_b20442 0.60 -1.1 453,873 - SM_b20442 0.60 +3.0 453,962 - SM_b20442 0.69 +0.4 453,962 - SM_b20442 0.69 +0.1 454,416 + SM_b20443 0.15 +0.0 454,417 - SM_b20443 0.15 +1.6 454,417 - SM_b20443 0.15 -0.1 454,495 - SM_b20443 0.29 -0.4 454,513 - SM_b20443 0.32 +0.6 454,617 + SM_b20443 0.50 +0.8 454,617 + SM_b20443 0.50 -0.2 454,617 + +1.3 454,617 + SM_b20443 0.50 +0.4 454,618 - SM_b20443 0.50 -1.3 454,618 - SM_b20443 0.50 +0.3 454,618 - SM_b20443 0.50 -1.2 454,618 - SM_b20443 0.50 -0.8 454,618 - SM_b20443 0.50 +0.3 454,624 - SM_b20443 0.51 +0.2 454,693 - SM_b20443 0.64 +0.2 454,716 + SM_b20443 0.68 +0.9 454,716 + SM_b20443 0.68 +1.0 454,753 + SM_b20443 0.74 +2.6 454,779 + SM_b20443 0.79 +0.2 454,780 - SM_b20443 0.79 +1.0 454,780 - SM_b20443 0.79 -0.1 454,854 + -0.3 454,935 + -1.0 454,936 - -1.3 454,936 - -0.6 454,991 + -0.2 455,003 + -1.3 455,004 - +0.1 455,135 + SM_b20444 0.16 -2.2 455,136 - SM_b20444 0.16 -0.4
Or see this region's nucleotide sequence