Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20336 and SM_b20337 are separated by 57 nucleotides SM_b20337 and SM_b20338 are separated by 97 nucleotides SM_b20338 and SM_b20339 are separated by 88 nucleotides SM_b20339 and SM_b20340 are separated by 69 nucleotides
SM_b20336: SM_b20336 - hypothetical protein, at 341,927 to 342,718
_b20336
SM_b20337: SM_b20337 - transcriptional regulator, at 342,776 to 343,387
_b20337
SM_b20338: SM_b20338 - efflux protein, at 343,485 to 344,708
_b20338
SM_b20339: SM_b20339 - hypothetical protein, at 344,797 to 345,279
_b20339
SM_b20340: SM_b20340 - hypothetical protein, at 345,349 to 345,528
_b20340
Position (kb) 343
344
345 Strain fitness (log2 ratio) -2
-1
0
1 at 342.497 kb on + strand, within SM_b20336 at 342.497 kb on + strand, within SM_b20336 at 342.518 kb on + strand, within SM_b20336 at 342.716 kb on + strand at 342.716 kb on + strand at 343.685 kb on - strand, within SM_b20338 at 343.844 kb on - strand, within SM_b20338 at 343.877 kb on - strand, within SM_b20338 at 343.877 kb on - strand, within SM_b20338 at 343.941 kb on + strand, within SM_b20338 at 343.941 kb on + strand, within SM_b20338 at 343.941 kb on + strand, within SM_b20338 at 343.941 kb on + strand, within SM_b20338 at 343.941 kb on + strand, within SM_b20338 at 343.942 kb on - strand, within SM_b20338 at 343.942 kb on - strand, within SM_b20338 at 343.944 kb on - strand, within SM_b20338 at 343.979 kb on - strand, within SM_b20338 at 343.979 kb on - strand, within SM_b20338 at 343.982 kb on + strand, within SM_b20338 at 343.982 kb on + strand, within SM_b20338 at 343.983 kb on - strand, within SM_b20338 at 344.045 kb on + strand, within SM_b20338 at 344.135 kb on + strand, within SM_b20338 at 344.649 kb on - strand at 344.822 kb on + strand at 344.928 kb on - strand, within SM_b20339 at 344.928 kb on - strand, within SM_b20339 at 344.997 kb on + strand, within SM_b20339 at 344.997 kb on + strand, within SM_b20339 at 344.997 kb on + strand, within SM_b20339 at 344.998 kb on - strand, within SM_b20339 at 345.193 kb on + strand, within SM_b20339 at 345.193 kb on + strand, within SM_b20339 at 345.193 kb on + strand, within SM_b20339 at 345.193 kb on + strand, within SM_b20339 at 345.194 kb on - strand, within SM_b20339 at 345.194 kb on - strand, within SM_b20339 at 345.496 kb on - strand, within SM_b20340 at 345.511 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 342,497 + SM_b20336 0.72 -0.6 342,497 + SM_b20336 0.72 -2.0 342,518 + SM_b20336 0.75 +0.3 342,716 + -0.4 342,716 + -0.5 343,685 - SM_b20338 0.16 -0.8 343,844 - SM_b20338 0.29 +1.3 343,877 - SM_b20338 0.32 -2.4 343,877 - SM_b20338 0.32 -0.6 343,941 + SM_b20338 0.37 -0.5 343,941 + SM_b20338 0.37 -1.9 343,941 + SM_b20338 0.37 -1.7 343,941 + SM_b20338 0.37 -1.9 343,941 + SM_b20338 0.37 +0.8 343,942 - SM_b20338 0.37 -0.6 343,942 - SM_b20338 0.37 -0.4 343,944 - SM_b20338 0.38 +0.3 343,979 - SM_b20338 0.40 -0.2 343,979 - SM_b20338 0.40 -0.7 343,982 + SM_b20338 0.41 +0.1 343,982 + SM_b20338 0.41 +0.2 343,983 - SM_b20338 0.41 -0.3 344,045 + SM_b20338 0.46 +0.4 344,135 + SM_b20338 0.53 +1.3 344,649 - +0.0 344,822 + -1.7 344,928 - SM_b20339 0.27 +1.1 344,928 - SM_b20339 0.27 -1.6 344,997 + SM_b20339 0.41 +0.3 344,997 + SM_b20339 0.41 -2.6 344,997 + SM_b20339 0.41 +0.4 344,998 - SM_b20339 0.42 -0.6 345,193 + SM_b20339 0.82 -0.5 345,193 + SM_b20339 0.82 +1.6 345,193 + SM_b20339 0.82 -0.0 345,193 + SM_b20339 0.82 -0.7 345,194 - SM_b20339 0.82 -0.0 345,194 - SM_b20339 0.82 +0.9 345,496 - SM_b20340 0.82 -0.9 345,511 + +0.5
Or see this region's nucleotide sequence