Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20113 and SM_b20114 are separated by 2 nucleotides SM_b20114 and SM_b20115 are separated by 26 nucleotides SM_b20115 and SM_b20116 are separated by 134 nucleotides
SM_b20113: SM_b20113 - dehydrogenase, at 124,709 to 125,641
_b20113
SM_b20114: SM_b20114 - hypothetical protein, at 125,644 to 126,369
_b20114
SM_b20115: SM_b20115 - dihydroxy-acid dehydratase, at 126,396 to 128,117
_b20115
SM_b20116: SM_b20116 - hypothetical protein, at 128,252 to 130,456
_b20116
Position (kb) 126
127
128
129 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 125.412 kb on + strand, within SM_b20113 at 125.465 kb on - strand, within SM_b20113 at 125.558 kb on - strand at 125.646 kb on - strand at 125.709 kb on - strand at 126.197 kb on + strand, within SM_b20114 at 126.198 kb on - strand, within SM_b20114 at 126.198 kb on - strand, within SM_b20114 at 126.208 kb on - strand, within SM_b20114 at 126.319 kb on + strand at 126.319 kb on + strand at 126.359 kb on + strand at 126.359 kb on + strand at 126.359 kb on + strand at 126.359 kb on + strand at 126.360 kb on - strand at 126.360 kb on - strand at 126.360 kb on - strand at 126.503 kb on - strand at 126.515 kb on - strand at 126.558 kb on + strand at 126.688 kb on + strand, within SM_b20115 at 126.773 kb on + strand, within SM_b20115 at 127.009 kb on + strand, within SM_b20115 at 127.010 kb on - strand, within SM_b20115 at 127.010 kb on - strand, within SM_b20115 at 127.162 kb on + strand, within SM_b20115 at 127.162 kb on + strand, within SM_b20115 at 127.163 kb on - strand, within SM_b20115 at 127.180 kb on + strand, within SM_b20115 at 127.181 kb on - strand, within SM_b20115 at 127.181 kb on - strand, within SM_b20115 at 127.430 kb on + strand, within SM_b20115 at 127.430 kb on + strand, within SM_b20115 at 127.431 kb on - strand, within SM_b20115 at 127.547 kb on - strand, within SM_b20115 at 127.622 kb on - strand, within SM_b20115 at 127.770 kb on + strand, within SM_b20115 at 128.127 kb on + strand at 128.128 kb on - strand at 128.159 kb on + strand at 128.159 kb on + strand at 128.159 kb on + strand at 128.160 kb on - strand at 128.160 kb on - strand at 128.160 kb on - strand at 128.160 kb on - strand at 128.469 kb on + strand at 128.518 kb on - strand, within SM_b20116 at 128.561 kb on + strand, within SM_b20116 at 128.561 kb on + strand, within SM_b20116 at 128.561 kb on + strand, within SM_b20116 at 128.561 kb on + strand, within SM_b20116 at 128.589 kb on + strand, within SM_b20116 at 128.590 kb on - strand, within SM_b20116 at 128.646 kb on + strand, within SM_b20116 at 128.706 kb on + strand, within SM_b20116 at 128.707 kb on - strand, within SM_b20116 at 128.795 kb on + strand, within SM_b20116 at 128.796 kb on - strand, within SM_b20116 at 128.901 kb on + strand, within SM_b20116 at 128.902 kb on - strand, within SM_b20116 at 129.042 kb on + strand, within SM_b20116 at 129.042 kb on + strand, within SM_b20116 at 129.042 kb on + strand, within SM_b20116 at 129.042 kb on + strand, within SM_b20116 at 129.051 kb on - strand, within SM_b20116
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 125,412 + SM_b20113 0.75 +0.7 125,465 - SM_b20113 0.81 -0.4 125,558 - -0.9 125,646 - -0.3 125,709 - -0.3 126,197 + SM_b20114 0.76 -1.6 126,198 - SM_b20114 0.76 -0.8 126,198 - SM_b20114 0.76 +0.2 126,208 - SM_b20114 0.78 +0.5 126,319 + -0.1 126,319 + -2.0 126,359 + +0.3 126,359 + +1.0 126,359 + -0.5 126,359 + +0.0 126,360 - -0.6 126,360 - +1.5 126,360 - -1.0 126,503 - -0.2 126,515 - -0.5 126,558 + -0.7 126,688 + SM_b20115 0.17 +0.7 126,773 + SM_b20115 0.22 +0.2 127,009 + SM_b20115 0.36 -0.2 127,010 - SM_b20115 0.36 -3.2 127,010 - SM_b20115 0.36 -0.9 127,162 + SM_b20115 0.44 -0.6 127,162 + SM_b20115 0.44 +0.1 127,163 - SM_b20115 0.45 -2.8 127,180 + SM_b20115 0.46 -0.5 127,181 - SM_b20115 0.46 -0.4 127,181 - SM_b20115 0.46 +1.0 127,430 + SM_b20115 0.60 -0.5 127,430 + SM_b20115 0.60 -0.3 127,431 - SM_b20115 0.60 -1.0 127,547 - SM_b20115 0.67 -0.5 127,622 - SM_b20115 0.71 +0.4 127,770 + SM_b20115 0.80 -0.3 128,127 + -0.3 128,128 - -0.6 128,159 + -0.4 128,159 + -0.2 128,159 + +1.5 128,160 - +0.0 128,160 - -0.6 128,160 - -0.7 128,160 - -2.7 128,469 + +0.0 128,518 - SM_b20116 0.12 +0.3 128,561 + SM_b20116 0.14 +0.4 128,561 + SM_b20116 0.14 -0.1 128,561 + SM_b20116 0.14 -0.2 128,561 + SM_b20116 0.14 +1.9 128,589 + SM_b20116 0.15 +0.5 128,590 - SM_b20116 0.15 +0.1 128,646 + SM_b20116 0.18 +0.6 128,706 + SM_b20116 0.21 +1.0 128,707 - SM_b20116 0.21 +0.4 128,795 + SM_b20116 0.25 -0.7 128,796 - SM_b20116 0.25 -0.3 128,901 + SM_b20116 0.29 -0.0 128,902 - SM_b20116 0.29 +1.0 129,042 + SM_b20116 0.36 +1.2 129,042 + SM_b20116 0.36 -0.4 129,042 + SM_b20116 0.36 -0.4 129,042 + SM_b20116 0.36 +0.1 129,051 - SM_b20116 0.36 -0.3
Or see this region's nucleotide sequence