Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20101 and SM_b20102 are separated by 87 nucleotides SM_b20102 and SM_b20103 are separated by 214 nucleotides
SM_b20101: SM_b20101 - hydroxyglutarate oxidase, at 109,808 to 111,088
_b20101
SM_b20102: SM_b20102 - acetoin catabolism regulatory protein, at 111,176 to 113,059
_b20102
SM_b20103: SM_b20103 - FAD-dependent oxidoreductase, at 113,274 to 115,076
_b20103
Position (kb)
111
112
113
114 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 110.186 kb on + strand, within SM_b20101 at 110.186 kb on + strand, within SM_b20101 at 110.186 kb on + strand, within SM_b20101 at 110.187 kb on - strand, within SM_b20101 at 110.228 kb on - strand, within SM_b20101 at 110.513 kb on + strand, within SM_b20101 at 110.517 kb on - strand, within SM_b20101 at 110.517 kb on - strand, within SM_b20101 at 110.562 kb on - strand, within SM_b20101 at 110.801 kb on + strand, within SM_b20101 at 110.802 kb on - strand, within SM_b20101 at 110.842 kb on - strand, within SM_b20101 at 110.842 kb on - strand, within SM_b20101 at 110.842 kb on - strand, within SM_b20101 at 111.087 kb on - strand at 111.111 kb on + strand at 111.111 kb on + strand at 111.317 kb on + strand at 111.317 kb on + strand at 111.318 kb on - strand at 111.318 kb on - strand at 111.319 kb on + strand at 111.340 kb on + strand at 111.340 kb on + strand at 111.341 kb on - strand at 111.425 kb on - strand, within SM_b20102 at 111.428 kb on + strand, within SM_b20102 at 111.428 kb on + strand, within SM_b20102 at 111.428 kb on + strand, within SM_b20102 at 111.428 kb on + strand, within SM_b20102 at 111.428 kb on + strand, within SM_b20102 at 111.429 kb on - strand, within SM_b20102 at 111.429 kb on - strand, within SM_b20102 at 111.519 kb on - strand, within SM_b20102 at 111.663 kb on - strand, within SM_b20102 at 111.809 kb on - strand, within SM_b20102 at 112.030 kb on + strand, within SM_b20102 at 112.643 kb on + strand, within SM_b20102 at 112.644 kb on - strand, within SM_b20102 at 112.752 kb on + strand, within SM_b20102 at 112.753 kb on - strand, within SM_b20102 at 113.269 kb on + strand at 113.385 kb on + strand at 113.711 kb on + strand, within SM_b20103 at 113.758 kb on - strand, within SM_b20103 at 113.758 kb on - strand, within SM_b20103 at 113.895 kb on + strand, within SM_b20103 at 113.895 kb on + strand, within SM_b20103 at 113.928 kb on + strand, within SM_b20103 at 113.929 kb on - strand, within SM_b20103 at 113.943 kb on + strand, within SM_b20103 at 113.944 kb on - strand, within SM_b20103 at 113.944 kb on - strand, within SM_b20103 at 113.944 kb on - strand, within SM_b20103 at 113.945 kb on + strand, within SM_b20103 at 113.946 kb on - strand, within SM_b20103 at 114.012 kb on + strand, within SM_b20103 at 114.012 kb on + strand, within SM_b20103 at 114.013 kb on - strand, within SM_b20103 at 114.013 kb on - strand, within SM_b20103 at 114.013 kb on - strand, within SM_b20103 at 114.013 kb on - strand, within SM_b20103 at 114.013 kb on - strand, within SM_b20103 at 114.014 kb on + strand, within SM_b20103 at 114.015 kb on - strand, within SM_b20103 at 114.037 kb on - strand, within SM_b20103 at 114.037 kb on - strand, within SM_b20103
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 110,186 + SM_b20101 0.30 +0.2 110,186 + SM_b20101 0.30 -3.6 110,186 + SM_b20101 0.30 -0.2 110,187 - SM_b20101 0.30 +0.7 110,228 - SM_b20101 0.33 -0.2 110,513 + SM_b20101 0.55 +1.0 110,517 - SM_b20101 0.55 +0.6 110,517 - SM_b20101 0.55 +0.2 110,562 - SM_b20101 0.59 +0.5 110,801 + SM_b20101 0.78 -0.4 110,802 - SM_b20101 0.78 -0.4 110,842 - SM_b20101 0.81 +0.1 110,842 - SM_b20101 0.81 -0.3 110,842 - SM_b20101 0.81 -0.1 111,087 - -1.2 111,111 + -0.8 111,111 + -0.7 111,317 + +0.8 111,317 + +1.8 111,318 - +1.2 111,318 - -0.4 111,319 + -1.1 111,340 + +0.0 111,340 + -0.7 111,341 - +0.9 111,425 - SM_b20102 0.13 +0.0 111,428 + SM_b20102 0.13 +2.9 111,428 + SM_b20102 0.13 -0.5 111,428 + SM_b20102 0.13 -1.7 111,428 + SM_b20102 0.13 -4.1 111,428 + SM_b20102 0.13 -0.9 111,429 - SM_b20102 0.13 -0.3 111,429 - SM_b20102 0.13 +0.6 111,519 - SM_b20102 0.18 -0.8 111,663 - SM_b20102 0.26 -0.4 111,809 - SM_b20102 0.34 -2.2 112,030 + SM_b20102 0.45 -0.8 112,643 + SM_b20102 0.78 -0.5 112,644 - SM_b20102 0.78 -0.3 112,752 + SM_b20102 0.84 -0.5 112,753 - SM_b20102 0.84 +0.5 113,269 + +1.3 113,385 + -0.5 113,711 + SM_b20103 0.24 +0.0 113,758 - SM_b20103 0.27 +0.8 113,758 - SM_b20103 0.27 +0.9 113,895 + SM_b20103 0.34 -0.4 113,895 + SM_b20103 0.34 +0.8 113,928 + SM_b20103 0.36 +1.2 113,929 - SM_b20103 0.36 +0.2 113,943 + SM_b20103 0.37 +0.2 113,944 - SM_b20103 0.37 -0.2 113,944 - SM_b20103 0.37 +0.6 113,944 - SM_b20103 0.37 -0.2 113,945 + SM_b20103 0.37 +0.2 113,946 - SM_b20103 0.37 -0.6 114,012 + SM_b20103 0.41 -0.5 114,012 + SM_b20103 0.41 +0.5 114,013 - SM_b20103 0.41 +0.2 114,013 - SM_b20103 0.41 -1.0 114,013 - SM_b20103 0.41 -0.3 114,013 - SM_b20103 0.41 -0.5 114,013 - SM_b20103 0.41 -1.0 114,014 + SM_b20103 0.41 +1.0 114,015 - SM_b20103 0.41 +1.0 114,037 - SM_b20103 0.42 +0.9 114,037 - SM_b20103 0.42 -3.2
Or see this region's nucleotide sequence