Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20013 and SM_b20014 are separated by 53 nucleotides SM_b20014 and SM_b20015 are separated by 13 nucleotides SM_b20015 and SM_b20016 overlap by 4 nucleotides
SM_b20013: SM_b20013 - hypothetical protein, at 19,079 to 20,323
_b20013
SM_b20014: SM_b20014 - transcriptional regulator, at 20,377 to 21,378
_b20014
SM_b20015: SM_b20015 - sugar ABC transporter permease, at 21,392 to 22,348
_b20015
SM_b20016: SM_b20016 - sugar ABC transporter permease, at 22,345 to 23,337
_b20016
Position (kb) 20
21
22 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 19.382 kb on + strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.423 kb on - strand, within SM_b20013 at 19.423 kb on - strand, within SM_b20013 at 19.470 kb on + strand, within SM_b20013 at 19.471 kb on - strand, within SM_b20013 at 19.569 kb on + strand, within SM_b20013 at 19.612 kb on - strand, within SM_b20013 at 19.911 kb on + strand, within SM_b20013 at 19.912 kb on - strand, within SM_b20013 at 20.068 kb on - strand, within SM_b20013 at 20.209 kb on - strand at 20.269 kb on + strand at 20.382 kb on + strand at 20.382 kb on + strand at 20.383 kb on - strand at 20.383 kb on - strand at 20.537 kb on + strand, within SM_b20014 at 20.537 kb on + strand, within SM_b20014 at 20.537 kb on + strand, within SM_b20014 at 20.537 kb on + strand, within SM_b20014 at 20.555 kb on + strand, within SM_b20014 at 20.556 kb on - strand, within SM_b20014 at 20.837 kb on - strand, within SM_b20014 at 20.838 kb on + strand, within SM_b20014 at 20.838 kb on + strand, within SM_b20014 at 20.839 kb on - strand, within SM_b20014 at 20.839 kb on - strand, within SM_b20014 at 21.150 kb on - strand, within SM_b20014 at 21.237 kb on - strand, within SM_b20014 at 21.421 kb on - strand at 21.421 kb on - strand at 21.612 kb on + strand, within SM_b20015 at 21.612 kb on + strand, within SM_b20015 at 21.613 kb on - strand, within SM_b20015 at 21.613 kb on - strand, within SM_b20015 at 21.613 kb on - strand, within SM_b20015 at 21.613 kb on - strand, within SM_b20015 at 21.649 kb on - strand, within SM_b20015 at 21.741 kb on + strand, within SM_b20015 at 21.741 kb on + strand, within SM_b20015 at 21.741 kb on + strand, within SM_b20015 at 21.742 kb on - strand, within SM_b20015 at 21.742 kb on - strand, within SM_b20015 at 21.742 kb on - strand, within SM_b20015 at 21.771 kb on + strand, within SM_b20015 at 21.772 kb on - strand, within SM_b20015 at 21.772 kb on - strand, within SM_b20015 at 22.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 19,382 + SM_b20013 0.24 +0.3 19,383 - SM_b20013 0.24 +0.9 19,383 - SM_b20013 0.24 +0.2 19,383 - SM_b20013 0.24 +0.7 19,383 - SM_b20013 0.24 -1.3 19,423 - SM_b20013 0.28 +0.0 19,423 - SM_b20013 0.28 +0.5 19,470 + SM_b20013 0.31 +0.2 19,471 - SM_b20013 0.31 -0.7 19,569 + SM_b20013 0.39 -0.4 19,612 - SM_b20013 0.43 +0.1 19,911 + SM_b20013 0.67 -0.2 19,912 - SM_b20013 0.67 +0.5 20,068 - SM_b20013 0.79 -0.8 20,209 - -0.2 20,269 + +0.7 20,382 + +0.4 20,382 + -0.2 20,383 - -0.2 20,383 - -1.4 20,537 + SM_b20014 0.16 -0.1 20,537 + SM_b20014 0.16 +0.4 20,537 + SM_b20014 0.16 +0.6 20,537 + SM_b20014 0.16 -1.1 20,555 + SM_b20014 0.18 +1.1 20,556 - SM_b20014 0.18 +0.4 20,837 - SM_b20014 0.46 +0.3 20,838 + SM_b20014 0.46 -0.2 20,838 + SM_b20014 0.46 -0.5 20,839 - SM_b20014 0.46 -0.5 20,839 - SM_b20014 0.46 -0.2 21,150 - SM_b20014 0.77 +0.2 21,237 - SM_b20014 0.86 -0.3 21,421 - +0.2 21,421 - +0.4 21,612 + SM_b20015 0.23 +0.1 21,612 + SM_b20015 0.23 -0.4 21,613 - SM_b20015 0.23 +0.3 21,613 - SM_b20015 0.23 -1.0 21,613 - SM_b20015 0.23 +0.3 21,613 - SM_b20015 0.23 -3.1 21,649 - SM_b20015 0.27 -2.2 21,741 + SM_b20015 0.36 -1.5 21,741 + SM_b20015 0.36 -0.2 21,741 + SM_b20015 0.36 -1.2 21,742 - SM_b20015 0.37 -0.1 21,742 - SM_b20015 0.37 +0.6 21,742 - SM_b20015 0.37 +0.1 21,771 + SM_b20015 0.40 -0.1 21,772 - SM_b20015 0.40 +0.8 21,772 - SM_b20015 0.40 -1.9 22,279 - +1.0
Or see this region's nucleotide sequence