Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03845

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
4,010,623	-		CCNA_03844	0.32	-1.1
4,010,633	+		CCNA_03844	0.33	+3.8
4,010,693	-		CCNA_03844	0.38	+1.6
4,010,728	-		CCNA_03844	0.40	-0.7
4,010,729	+		CCNA_03844	0.40	-0.6
4,010,729	+		CCNA_03844	0.40	-1.9
4,010,729	+		CCNA_03844	0.40	+1.7
4,010,739	+		CCNA_03844	0.41	-1.0
4,010,760	-		CCNA_03844	0.43	+1.7
4,010,761	-		CCNA_03844	0.43	-1.0
4,010,831	+		CCNA_03844	0.48	+1.1
4,010,836	+		CCNA_03844	0.49	-0.2
4,010,863	-		CCNA_03844	0.51	+1.4
4,010,913	+		CCNA_03844	0.55	-0.9
4,011,000	+		CCNA_03844	0.61	-0.9
4,011,007	-		CCNA_03844	0.62	-0.9
4,011,032	-		CCNA_03844	0.64	-2.1
4,011,054	+		CCNA_03844	0.66	-1.6
4,011,054	+		CCNA_03844	0.66	-0.2
4,011,054	+		CCNA_03844	0.66	-0.6
4,011,054	+		CCNA_03844	0.66	-0.7
4,011,054	+		CCNA_03844	0.66	+1.6
4,011,062	-		CCNA_03844	0.66	-0.4
4,011,062	-		CCNA_03844	0.66	+0.6
4,011,062	-		CCNA_03844	0.66	-2.8
4,011,062	-		CCNA_03844	0.66	-0.9
4,011,062	-		CCNA_03844	0.66	-0.2
4,011,062	-		CCNA_03844	0.66	-1.2
4,011,067	-		CCNA_03844	0.67	-2.1
4,011,073	-		CCNA_03844	0.67	+0.5
4,011,110	+		CCNA_03844	0.70	+0.1
4,011,110	-		CCNA_03844	0.70	-0.4
4,011,130	-		CCNA_03844	0.71	-2.7
4,011,157	+		CCNA_03844	0.74	-0.9
4,011,157	+		CCNA_03844	0.74	+1.2
4,011,157	+		CCNA_03844	0.74	+1.8
4,011,157	+		CCNA_03844	0.74	+0.7
4,011,157	+		CCNA_03844	0.74	+0.5
4,011,159	+		CCNA_03844	0.74	+0.6
4,011,165	-		CCNA_03844	0.74	-2.3
4,011,165	-		CCNA_03844	0.74	-0.1
4,011,206	-		CCNA_03844	0.77	+0.2
4,011,206	-		CCNA_03844	0.77	+0.1
4,011,264	+		CCNA_03844	0.82	+1.3
4,011,264	+		CCNA_03844	0.82	+0.7
4,011,294	+		CCNA_03844	0.84	+0.4
4,011,297	-		CCNA_03844	0.84	-0.7
4,011,318	-		CCNA_03844	0.86	+0.6
4,011,325	+		CCNA_03844	0.87	-0.5
4,011,333	-		CCNA_03844	0.87	-1.1
4,011,338	+		CCNA_03844	0.88	-0.3
4,011,437	+				+1.4
4,011,439	+				+1.0
4,011,439	-				-0.7
4,011,445	-				-1.0
4,011,470	+				+2.7
4,011,478	-				-0.7
4,011,517	+				+0.8
4,011,517	+				+1.5
4,011,517	+				+2.3
4,011,519	-				-0.3
4,011,522	+				+3.1
4,011,524	+				+1.5
4,011,525	-				-1.8
4,011,535	+				+1.7
4,011,575	-				-1.0
4,011,591	+				+1.2
4,011,631	-				+0.2
4,011,658	-				-0.4
4,011,783	+		CCNA_03845	0.18	+0.5
4,011,783	+		CCNA_03845	0.18	+1.4
4,011,783	+		CCNA_03845	0.18	+0.7
4,011,783	+		CCNA_03845	0.18	-0.5
4,011,783	+		CCNA_03845	0.18	+1.1
4,011,783	+		CCNA_03845	0.18	+1.1
4,011,783	-		CCNA_03845	0.18	-0.2
4,011,791	-		CCNA_03845	0.19	-0.5
4,011,791	-		CCNA_03845	0.19	-1.0
4,011,791	-		CCNA_03845	0.19	-1.1
4,011,814	+		CCNA_03845	0.21	+0.5
4,011,822	-		CCNA_03845	0.22	-0.3
4,011,822	-		CCNA_03845	0.22	-0.4
4,011,837	+		CCNA_03845	0.24	-0.9
4,011,926	+		CCNA_03845	0.34	+0.4
4,011,936	+		CCNA_03845	0.35	+1.6
4,011,936	+		CCNA_03845	0.35	+0.8
4,011,944	-				+1.4
4,011,944	-		CCNA_03845	0.36	-1.9
4,011,955	+		CCNA_03845	0.37	+0.1
4,011,965	+		CCNA_03845	0.38	+0.0
4,012,034	+		CCNA_03845	0.46	+0.1
4,012,042	-		CCNA_03845	0.46	+1.4
4,012,049	+		CCNA_03845	0.47	+0.5
4,012,101	+		CCNA_03845	0.53	-0.0
4,012,108	-		CCNA_03845	0.54	+0.4
4,012,108	-		CCNA_03845	0.54	+1.6
4,012,125	-				+2.1
4,012,141	+		CCNA_03845	0.57	+0.4
4,012,141	+		CCNA_03845	0.57	+1.9
4,012,146	-		CCNA_03845	0.58	+1.1
4,012,149	-		CCNA_03845	0.58	-1.4
4,012,174	+		CCNA_03845	0.61	+1.9
4,012,183	-		CCNA_03845	0.62	-0.4
4,012,208	+		CCNA_03845	0.65	-0.9
4,012,215	+		CCNA_03845	0.66	+0.2
4,012,248	-		CCNA_03845	0.69	-1.4
4,012,248	-		CCNA_03845	0.69	-0.1
4,012,367	+		CCNA_03845	0.82	-1.4
4,012,367	+		CCNA_03845	0.82	-0.4
4,012,367	+		CCNA_03845	0.82	-0.0
4,012,367	+		CCNA_03845	0.82	+1.1
4,012,370	-		CCNA_03845	0.83	-0.9
4,012,375	-		CCNA_03845	0.83	-1.3
4,012,375	-		CCNA_03845	0.83	-0.8
4,012,476	+				+1.0
4,012,476	+				-0.8
4,012,484	-				-1.6
4,012,506	-				+0.3
4,012,529	-				+1.6
4,012,534	+				-1.8
4,012,535	-				-1.0
4,012,548	-				+1.2
4,012,648	-		CCNA_03846	0.16	-0.0
4,012,662	-		CCNA_03846	0.19	+0.9
4,012,673	-		CCNA_03846	0.21	+0.7
4,012,695	+		CCNA_03846	0.26	-0.9
4,012,705	-		CCNA_03846	0.28	+2.9
4,012,705	-		CCNA_03846	0.28	-0.8
4,012,711	-		CCNA_03846	0.29	+0.4
4,012,729	-		CCNA_03846	0.33	-0.2
4,012,755	+		CCNA_03846	0.38	-0.0
4,012,763	-		CCNA_03846	0.40	+2.4
4,012,784	-		CCNA_03846	0.44	+0.1
4,012,820	+		CCNA_03846	0.52	-1.1
4,012,830	+		CCNA_03846	0.54	-2.2
4,012,843	-		CCNA_03846	0.57	-1.2
4,012,864	+		CCNA_03846	0.61	-0.1
4,012,872	-		CCNA_03846	0.63	-1.9
4,012,986	+		CCNA_03846	0.87	-1.3
4,012,986	+		CCNA_03846	0.87	+0.3
4,012,986	+		CCNA_03846	0.87	-0.2
4,012,994	-		CCNA_03846	0.88	-0.4
4,013,007	+				+0.7
4,013,027	-				-0.8
4,013,038	+				-1.2
4,013,038	+				-1.1
4,013,074	+				-0.6
4,013,082	-				-0.4
4,013,087	+				-2.0
4,013,097	+				-0.3
4,013,097	-				-2.2
4,013,101	+				-0.3
4,013,108	+				+0.9
4,013,146	+				-0.1
4,013,178	-				+0.6
4,013,215	+		CCNA_03847	0.14	+0.6
4,013,215	+		CCNA_03847	0.14	+0.3
4,013,220	+		CCNA_03847	0.15	-0.2
4,013,223	-		CCNA_03847	0.15	-0.3
4,013,234	+		CCNA_03847	0.17	-0.7
4,013,242	-		CCNA_03847	0.18	-1.7
4,013,270	+		CCNA_03847	0.22	-2.2
4,013,278	-		CCNA_03847	0.23	+1.7
4,013,284	+		CCNA_03847	0.24	+1.3
4,013,284	+		CCNA_03847	0.24	-0.8
4,013,292	-		CCNA_03847	0.25	-1.3
4,013,294	+		CCNA_03847	0.25	-0.5
4,013,294	+		CCNA_03847	0.25	+1.1
4,013,302	-		CCNA_03847	0.26	+0.5
4,013,316	+		CCNA_03847	0.28	+1.0
4,013,324	-		CCNA_03847	0.29	+1.2
4,013,339	+		CCNA_03847	0.31	+0.6
4,013,360	+		CCNA_03847	0.34	+2.1
4,013,360	+		CCNA_03847	0.34	+0.7
4,013,368	-		CCNA_03847	0.35	+0.9
4,013,370	+		CCNA_03847	0.36	+0.1
4,013,377	+		CCNA_03847	0.37	+1.3
4,013,409	+		CCNA_03847	0.41	-0.5
4,013,409	-		CCNA_03847	0.41	-2.3
4,013,415	+		CCNA_03847	0.42	-0.7
4,013,449	-		CCNA_03847	0.46	-0.8
4,013,503	-		CCNA_03847	0.54	-3.0
4,013,515	-		CCNA_03847	0.56	+0.8