Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03831

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,994,756	+		CCNA_03830	0.12	+2.1
3,994,766	+		CCNA_03830	0.13	+3.3
3,994,768	-		CCNA_03830	0.13	-1.6
3,994,771	+		CCNA_03830	0.13	+1.4
3,994,774	-		CCNA_03830	0.13	-0.6
3,994,774	-		CCNA_03830	0.13	-1.6
3,994,774	-		CCNA_03830	0.13	-1.6
3,994,774	-		CCNA_03830	0.13	+1.7
3,994,776	+				+4.5
3,994,776	+		CCNA_03830	0.14	+1.1
3,994,776	+		CCNA_03830	0.14	+1.3
3,994,784	-		CCNA_03830	0.14	+0.0
3,994,794	+		CCNA_03830	0.15	+0.9
3,994,846	-		CCNA_03830	0.20	+1.7
3,994,857	-		CCNA_03830	0.21	+1.7
3,994,859	+		CCNA_03830	0.21	-0.0
3,994,859	+		CCNA_03830	0.21	+2.1
3,994,878	+		CCNA_03830	0.23	+1.5
3,994,905	+		CCNA_03830	0.25	+1.6
3,994,960	+		CCNA_03830	0.30	+1.8
3,994,960	+		CCNA_03830	0.30	+2.3
3,994,968	-		CCNA_03830	0.31	+1.0
3,994,968	-		CCNA_03830	0.31	+1.4
3,994,968	-		CCNA_03830	0.31	-1.5
3,994,968	-		CCNA_03830	0.31	-0.3
3,994,980	+		CCNA_03830	0.32	+0.8
3,995,005	+		CCNA_03830	0.34	+2.6
3,995,007	+		CCNA_03830	0.34	+3.1
3,995,058	-		CCNA_03830	0.39	-0.8
3,995,069	+		CCNA_03830	0.40	+1.3
3,995,069	+		CCNA_03830	0.40	+0.9
3,995,072	-		CCNA_03830	0.40	+1.0
3,995,077	-		CCNA_03830	0.41	-1.0
3,995,091	+		CCNA_03830	0.42	+1.3
3,995,201	-		CCNA_03830	0.52	-0.7
3,995,201	-		CCNA_03830	0.52	+0.9
3,995,206	+		CCNA_03830	0.52	+2.4
3,995,246	+		CCNA_03830	0.56	+1.7
3,995,254	-		CCNA_03830	0.57	-0.8
3,995,254	-		CCNA_03830	0.57	-0.5
3,995,254	-		CCNA_03830	0.57	-3.0
3,995,258	-		CCNA_03830	0.57	+0.5
3,995,285	+		CCNA_03830	0.59	+2.3
3,995,293	-		CCNA_03830	0.60	-0.3
3,995,293	-		CCNA_03830	0.60	-1.3
3,995,346	+		CCNA_03830	0.65	-0.0
3,995,354	-		CCNA_03830	0.66	-0.5
3,995,359	-		CCNA_03830	0.66	-0.3
3,995,375	+		CCNA_03830	0.67	+1.0
3,995,375	+		CCNA_03830	0.67	-0.3
3,995,375	+		CCNA_03830	0.67	-0.1
3,995,375	+		CCNA_03830	0.67	-0.5
3,995,375	+		CCNA_03830	0.67	+0.7
3,995,375	+		CCNA_03830	0.67	-0.9
3,995,375	+		CCNA_03830	0.67	-1.6
3,995,375	+		CCNA_03830	0.67	+0.2
3,995,375	+		CCNA_03830	0.67	-0.4
3,995,375	+		CCNA_03830	0.67	+1.7
3,995,375	+		CCNA_03830	0.67	+1.9
3,995,375	+		CCNA_03830	0.67	-0.3
3,995,383	-		CCNA_03830	0.68	-0.1
3,995,383	-		CCNA_03830	0.68	+0.6
3,995,383	-		CCNA_03830	0.68	-1.6
3,995,383	-		CCNA_03830	0.68	-1.7
3,995,383	-		CCNA_03830	0.68	-1.8
3,995,383	-		CCNA_03830	0.68	+0.7
3,995,383	-		CCNA_03830	0.68	+1.4
3,995,384	-		CCNA_03830	0.68	+0.9
3,995,392	+		CCNA_03830	0.69	+4.0
3,995,401	-		CCNA_03830	0.70	-1.9
3,995,508	+		CCNA_03830	0.79	+1.3
3,995,508	+		CCNA_03830	0.79	+1.3
3,995,508	+		CCNA_03830	0.79	+1.3
3,995,508	+		CCNA_03830	0.79	+1.9
3,995,508	+		CCNA_03830	0.79	+1.7
3,995,516	-		CCNA_03830	0.80	-1.9
3,995,525	+		CCNA_03830	0.81	+1.1
3,995,568	-		CCNA_03830	0.85	+0.0
3,995,747	+				-0.2
3,995,755	-				-1.2
3,995,813	-				+1.7
3,995,823	+				+0.8
3,995,842	-				+0.0
3,995,864	-				-2.0
3,995,866	+				-2.2
3,995,866	+				-1.2
3,995,866	+				+0.1
3,995,866	+				-0.7
3,995,874	-				+0.7
3,995,884	+				+0.3
3,995,898	-				+0.1
3,995,937	+		CCNA_03831	0.12	+0.4
3,995,940	-		CCNA_03831	0.12	+1.2
3,995,942	+		CCNA_03831	0.12	+1.0
3,995,942	+		CCNA_03831	0.12	+0.0
3,995,942	+		CCNA_03831	0.12	+2.4
3,995,955	-		CCNA_03831	0.13	+0.0
3,996,019	+		CCNA_03831	0.17	+0.1
3,996,037	+		CCNA_03831	0.18	-0.6
3,996,120	+		CCNA_03831	0.23	+0.3
3,996,187	+		CCNA_03831	0.27	+0.5
3,996,224	-		CCNA_03831	0.30	+1.1
3,996,258	+		CCNA_03831	0.32	+0.1
3,996,258	+		CCNA_03831	0.32	+0.7
3,996,258	+		CCNA_03831	0.32	+1.1
3,996,266	-		CCNA_03831	0.32	-0.6
3,996,266	-		CCNA_03831	0.32	-1.9
3,996,270	+		CCNA_03831	0.32	+0.3
3,996,278	-		CCNA_03831	0.33	-2.9
3,996,337	-		CCNA_03831	0.37	+0.6
3,996,343	+		CCNA_03831	0.37	-0.4
3,996,351	-		CCNA_03831	0.38	-0.5
3,996,391	+		CCNA_03831	0.40	-1.5
3,996,414	+		CCNA_03831	0.41	-1.3
3,996,476	+		CCNA_03831	0.45	+1.0
3,996,476	-		CCNA_03831	0.45	+0.1
3,996,503	-		CCNA_03831	0.47	-2.5
3,996,542	-		CCNA_03831	0.49	+1.4
3,996,554	+		CCNA_03831	0.50	+0.4
3,996,563	-		CCNA_03831	0.51	+0.6
3,996,618	+		CCNA_03831	0.54	-0.7
3,996,645	-		CCNA_03831	0.56	-0.2
3,996,681	+		CCNA_03831	0.58	+2.0
3,996,705	-		CCNA_03831	0.60	+0.9
3,996,708	+		CCNA_03831	0.60	-0.0
3,996,735	+		CCNA_03831	0.61	-1.9
3,996,771	+		CCNA_03831	0.64	+1.7
3,996,834	+		CCNA_03831	0.68	+1.5
3,996,871	-		CCNA_03831	0.70	+1.4
3,996,871	-		CCNA_03831	0.70	+0.3
3,997,047	-		CCNA_03831	0.81	-2.5
3,997,103	-		CCNA_03831	0.84	+0.1
3,997,111	+		CCNA_03831	0.85	-0.1
3,997,116	+		CCNA_03831	0.85	+0.6
3,997,119	-		CCNA_03831	0.85	+0.3
3,997,170	+		CCNA_03831	0.89	+1.7
3,997,184	+		CCNA_03831	0.90	-0.2
3,997,251	+				+0.3
3,997,251	+				-0.6
3,997,259	-				-0.9
3,997,391	-				+0.7
3,997,483	+		CCNA_03832	0.19	+0.8
3,997,499	+		CCNA_03832	0.22	-1.3
3,997,500	-		CCNA_03832	0.22	-0.4
3,997,500	-		CCNA_03832	0.22	+0.4
3,997,584	-		CCNA_03832	0.35	-0.2
3,997,623	+		CCNA_03832	0.42	-0.7
3,997,629	+		CCNA_03832	0.43	+0.7
3,997,629	+		CCNA_03832	0.43	-1.8
3,997,629	+		CCNA_03832	0.43	+1.4
3,997,736	+		CCNA_03832	0.60	+0.2
3,997,822	+		CCNA_03832	0.75	-1.8
3,997,897	+		CCNA_03832	0.87	-0.6
3,997,917	+				-2.0
3,997,917	-				-0.2
3,997,944	+				-1.0
3,997,969	-				+0.9
3,997,971	+				-0.2
3,997,971	+				-1.4
3,997,971	+				+0.3
3,997,976	+				-0.9
3,997,976	+				-0.4
3,997,976	+				-0.2
3,997,976	+				-0.7
3,997,979	-				+2.4
3,997,979	-				+2.0
3,997,979	-				+2.7
3,997,986	+				+2.9
3,997,991	+				-0.9
3,997,991	+				-0.9
3,997,992	+				-1.6
3,997,999	-				+2.2
3,998,010	-				+1.8