Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03496

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,654,205	+				+0.4
3,654,230	-				+0.5
3,654,316	-				+1.0
3,654,348	+		CCNA_03495	0.11	-1.5
3,654,356	-		CCNA_03495	0.12	+1.2
3,654,356	-		CCNA_03495	0.12	+1.6
3,654,358	+				+2.9
3,654,366	-		CCNA_03495	0.13	+0.2
3,654,403	+		CCNA_03495	0.18	-3.0
3,654,446	-		CCNA_03495	0.23	+1.8
3,654,446	-		CCNA_03495	0.23	-0.1
3,654,513	+		CCNA_03495	0.31	-0.2
3,654,513	+		CCNA_03495	0.31	-2.3
3,654,516	-		CCNA_03495	0.32	+0.8
3,654,521	-		CCNA_03495	0.32	+1.3
3,654,521	-		CCNA_03495	0.32	+1.5
3,654,537	-		CCNA_03495	0.34	+1.1
3,654,590	+		CCNA_03495	0.41	-1.4
3,654,590	+		CCNA_03495	0.41	-1.6
3,654,596	-		CCNA_03495	0.42	+2.4
3,654,596	-		CCNA_03495	0.42	-0.4
3,654,612	-		CCNA_03495	0.44	+0.7
3,654,655	-		CCNA_03495	0.49	+2.3
3,654,676	+		CCNA_03495	0.52	+0.2
3,654,684	-		CCNA_03495	0.53	+0.8
3,654,686	+		CCNA_03495	0.53	-1.1
3,654,703	+		CCNA_03495	0.55	-0.8
3,654,709	-		CCNA_03495	0.56	+0.7
3,654,729	-		CCNA_03495	0.58	+1.6
3,654,751	-		CCNA_03495	0.61	+1.4
3,654,751	-		CCNA_03495	0.61	+1.0
3,654,779	+		CCNA_03495	0.65	-1.4
3,654,791	+		CCNA_03495	0.66	-2.0
3,654,851	+		CCNA_03495	0.74	-1.2
3,654,859	-		CCNA_03495	0.75	+3.7
3,654,859	-		CCNA_03495	0.75	+1.4
3,654,877	+		CCNA_03495	0.77	-1.0
3,654,877	+		CCNA_03495	0.77	-0.5
3,654,877	+		CCNA_03495	0.77	+1.2
3,654,877	+		CCNA_03495	0.77	-1.7
3,654,885	-		CCNA_03495	0.78	+0.3
3,654,885	-		CCNA_03495	0.78	-1.4
3,654,885	-		CCNA_03495	0.78	+1.5
3,654,891	+		CCNA_03495	0.79	+0.3
3,654,942	-		CCNA_03495	0.85	+1.8
3,654,956	+		CCNA_03495	0.87	-0.7
3,654,962	+		CCNA_03495	0.88	+1.5
3,654,964	-		CCNA_03495	0.88	+1.5
3,654,965	-		CCNA_03495	0.88	+1.2
3,654,965	-		CCNA_03495	0.88	+1.2
3,655,007	+				-0.2
3,655,068	+				-0.6
3,655,068	+				-0.8
3,655,068	+				+1.9
3,655,076	-				+1.8
3,655,076	-				+0.1
3,655,076	-				-0.0
3,655,102	+				+0.7
3,655,112	-				-0.5
3,655,229	+				+0.1
3,655,237	-		CCNA_03496	0.10	+0.7
3,655,449	+		CCNA_03496	0.38	-0.2
3,655,449	+		CCNA_03496	0.38	+0.1
3,655,457	-		CCNA_03496	0.39	+0.5
3,655,457	-		CCNA_03496	0.39	+0.2
3,655,471	+		CCNA_03496	0.41	+0.2
3,655,477	-		CCNA_03496	0.42	-1.3
3,655,490	-		CCNA_03496	0.43	+1.9
3,655,497	-		CCNA_03496	0.44	+3.4
3,655,505	+		CCNA_03496	0.45	+0.9
3,655,522	+		CCNA_03496	0.47	+0.4
3,655,523	-		CCNA_03496	0.48	+0.5
3,655,544	-		CCNA_03496	0.50	+0.5
3,655,593	-		CCNA_03496	0.57	+1.1
3,655,611	-		CCNA_03496	0.59	+0.5
3,655,626	+		CCNA_03496	0.61	+1.1
3,655,626	+		CCNA_03496	0.61	+0.7
3,655,634	-		CCNA_03496	0.62	+0.9
3,655,634	-		CCNA_03496	0.62	-0.6
3,655,634	-		CCNA_03496	0.62	-0.2
3,655,634	-		CCNA_03496	0.62	+0.9
3,655,664	-		CCNA_03496	0.66	+1.3
3,655,669	-		CCNA_03496	0.67	+0.6
3,655,669	-		CCNA_03496	0.67	-0.7
3,655,674	-		CCNA_03496	0.67	-0.3
3,655,754	-				+2.9
3,655,757	-		CCNA_03496	0.78	-1.4
3,655,816	+		CCNA_03496	0.86	-0.3
3,655,816	+		CCNA_03496	0.86	+0.2
3,655,824	-		CCNA_03496	0.87	-0.3
3,655,852	+				+0.4
3,655,863	+				+0.4
3,655,871	-				+0.2
3,655,893	-				+0.2
3,656,065	+				+3.9
3,656,078	-				-1.0
3,656,099	+				-0.3
3,656,113	+		CCNA_03497	0.11	+3.5
3,656,113	+		CCNA_03497	0.11	+3.1
3,656,121	-		CCNA_03497	0.13	+0.5
3,656,123	+		CCNA_03497	0.14	-1.1
3,656,131	-		CCNA_03497	0.15	-0.7
3,656,158	-		CCNA_03497	0.21	-1.9
3,656,168	-		CCNA_03497	0.24	+1.4
3,656,177	-		CCNA_03497	0.26	-1.3
3,656,193	+		CCNA_03497	0.29	+0.7
3,656,199	+		CCNA_03497	0.30	+0.9
3,656,201	-		CCNA_03497	0.31	+0.9
3,656,207	-		CCNA_03497	0.32	+1.6
3,656,216	-		CCNA_03497	0.34	+0.2
3,656,217	-		CCNA_03497	0.34	+1.3
3,656,217	-		CCNA_03497	0.34	+2.6
3,656,247	+		CCNA_03497	0.41	-1.6
3,656,286	+		CCNA_03497	0.50	+1.5
3,656,294	+		CCNA_03497	0.51	-0.3
3,656,338	+		CCNA_03497	0.61	+3.0
3,656,338	+		CCNA_03497	0.61	+0.9
3,656,338	+		CCNA_03497	0.61	+3.0
3,656,338	+		CCNA_03497	0.61	+2.6
3,656,338	+		CCNA_03497	0.61	+2.4
3,656,346	-		CCNA_03497	0.63	-1.5
3,656,346	-		CCNA_03497	0.63	+0.2
3,656,346	-		CCNA_03497	0.63	-0.5
3,656,356	-		CCNA_03497	0.65	+0.7
3,656,370	+		CCNA_03497	0.68	+2.0
3,656,441	+		CCNA_03497	0.84	+0.9
3,656,504	+				-1.3
3,656,504	+				-0.1
3,656,507	+				-0.2
3,656,519	+				+4.3
3,656,519	+				+4.2
3,656,519	+				+4.8
3,656,541	+		CCNA_03498	0.10	+4.9
3,656,552	+		CCNA_03498	0.14	+3.8
3,656,576	+		CCNA_03498	0.22	+4.4
3,656,612	+		CCNA_03498	0.34	+4.1
3,656,612	+		CCNA_03498	0.34	+4.1
3,656,612	+		CCNA_03498	0.34	+4.5
3,656,612	+		CCNA_03498	0.34	+4.2
3,656,647	+		CCNA_03498	0.46	+4.1
3,656,647	+		CCNA_03498	0.46	+4.5
3,656,647	+		CCNA_03498	0.46	+4.1
3,656,655	+		CCNA_03498	0.49	+4.5
3,656,655	+		CCNA_03498	0.49	+4.3
3,656,728	+		CCNA_03498	0.73	+4.0
3,656,747	+		CCNA_03498	0.80	+4.1
3,656,793	+				+1.2
3,656,801	-				-1.1
3,656,817	+				+1.2
3,656,817	+				-0.5
3,656,817	+				+1.0
3,656,817	+				-0.6
3,656,825	-				-1.8
3,656,847	+				+1.3
3,656,857	+				-0.5
3,656,857	+				+0.4
3,656,857	+				+0.6
3,656,874	+				+1.1
3,656,874	+				-0.2
3,656,879	+				-2.0
3,656,882	-		CCNA_03499	0.10	+0.6
3,656,882	-		CCNA_03499	0.10	-0.4
3,656,882	-		CCNA_03499	0.10	+2.7
3,656,882	-		CCNA_03499	0.10	-1.2
3,656,912	-		CCNA_03499	0.20	+1.3
3,656,912	-		CCNA_03499	0.20	+0.3