Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03388

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,560,268	-				+0.7
3,560,268	-				+5.2
3,560,268	-				-0.3
3,560,327	+				-0.4
3,560,367	+				+0.1
3,560,375	-				-0.5
3,560,407	-				-2.2
3,560,409	-				+1.6
3,560,409	-				-1.9
3,560,409	-				+1.7
3,560,409	-				+0.2
3,560,409	-				+1.7
3,560,409	-				-0.1
3,560,422	-				-0.5
3,560,496	+				+0.6
3,560,515	+				-1.4
3,560,566	+				-1.6
3,560,579	-		CCNA_03387	0.11	-1.8
3,560,617	+		CCNA_03387	0.16	-0.8
3,560,617	+		CCNA_03387	0.16	-2.3
3,560,625	-		CCNA_03387	0.18	+0.3
3,560,625	-		CCNA_03387	0.18	-1.4
3,560,669	+		CCNA_03387	0.24	-1.4
3,560,801	+		CCNA_03387	0.42	+1.6
3,560,820	+		CCNA_03387	0.45	+0.7
3,560,857	-		CCNA_03387	0.50	+0.9
3,560,872	-		CCNA_03387	0.52	+0.8
3,560,891	+		CCNA_03387	0.55	+1.1
3,560,914	-		CCNA_03387	0.58	-2.1
3,560,916	-		CCNA_03387	0.58	+0.1
3,560,954	-		CCNA_03387	0.64	-0.5
3,560,964	+		CCNA_03387	0.65	-0.8
3,560,972	-		CCNA_03387	0.66	+2.9
3,561,027	+		CCNA_03387	0.74	+0.6
3,561,027	+		CCNA_03387	0.74	+1.7
3,561,032	+		CCNA_03387	0.75	-0.9
3,561,032	+		CCNA_03387	0.75	+1.6
3,561,035	-		CCNA_03387	0.75	-0.4
3,561,035	-		CCNA_03387	0.75	-1.7
3,561,040	-		CCNA_03387	0.76	+0.0
3,561,040	-		CCNA_03387	0.76	-0.1
3,561,093	-		CCNA_03387	0.83	+0.3
3,561,118	-		CCNA_03387	0.87	-1.8
3,561,144	+				-1.1
3,561,146	+				-0.3
3,561,151	+				-0.5
3,561,151	+				-0.5
3,561,151	+				-0.4
3,561,152	-				-0.1
3,561,194	+				-0.3
3,561,201	-				-0.7
3,561,201	-				+0.2
3,561,202	-				-1.0
3,561,263	+				-0.6
3,561,263	+				-0.7
3,561,263	+				-1.4
3,561,271	-				-0.9
3,561,271	-				-1.8
3,561,271	-				-0.3
3,561,271	-				-0.2
3,561,311	-				-1.3
3,561,316	+				-1.2
3,561,324	+				-0.1
3,561,324	-				-1.1
3,561,324	-				+0.2
3,561,348	-		CCNA_03388	0.12	-0.6
3,561,353	+		CCNA_03388	0.12	-0.1
3,561,370	+		CCNA_03388	0.15	-2.6
3,561,370	+		CCNA_03388	0.15	+0.0
3,561,390	+		CCNA_03388	0.17	-0.9
3,561,391	+		CCNA_03388	0.18	-1.1
3,561,406	+		CCNA_03388	0.20	-0.1
3,561,468	-		CCNA_03388	0.28	-2.7
3,561,488	+		CCNA_03388	0.31	+0.4
3,561,488	+		CCNA_03388	0.31	-2.0
3,561,496	-		CCNA_03388	0.32	+0.3
3,561,496	-		CCNA_03388	0.32	-0.5
3,561,496	-		CCNA_03388	0.32	-0.1
3,561,518	+		CCNA_03388	0.35	-0.7
3,561,548	-		CCNA_03388	0.39	+0.9
3,561,556	+		CCNA_03388	0.40	-1.1
3,561,556	+		CCNA_03388	0.40	-0.5
3,561,563	-		CCNA_03388	0.41	+0.7
3,561,563	-		CCNA_03388	0.41	-0.1
3,561,564	-		CCNA_03388	0.41	-0.8
3,561,564	-		CCNA_03388	0.41	+0.6
3,561,564	-		CCNA_03388	0.41	-1.0
3,561,564	-		CCNA_03388	0.41	+0.6
3,561,564	-		CCNA_03388	0.41	-0.6
3,561,582	+		CCNA_03388	0.44	-0.7
3,561,603	-		CCNA_03388	0.47	-0.3
3,561,662	-		CCNA_03388	0.55	+0.2
3,561,690	+		CCNA_03388	0.59	-2.2
3,561,698	-		CCNA_03388	0.60	-1.1
3,561,729	+		CCNA_03388	0.64	-1.0
3,561,739	+		CCNA_03388	0.66	+1.0
3,561,739	+		CCNA_03388	0.66	+0.9
3,561,739	+		CCNA_03388	0.66	-1.6
3,561,741	+		CCNA_03388	0.66	-0.9
3,561,747	-		CCNA_03388	0.67	-1.0
3,561,747	-		CCNA_03388	0.67	-1.1
3,561,747	-		CCNA_03388	0.67	-1.0
3,561,747	-		CCNA_03388	0.67	-0.6
3,561,767	-		CCNA_03388	0.69	-1.6
3,561,778	+		CCNA_03388	0.71	-0.8
3,561,782	+		CCNA_03388	0.71	-1.1
3,561,782	+		CCNA_03388	0.71	-1.7
3,561,782	+		CCNA_03388	0.71	+0.3
3,561,782	+		CCNA_03388	0.71	-2.2
3,561,790	-		CCNA_03388	0.73	-0.5
3,561,806	-		CCNA_03388	0.75	-1.7
3,561,818	+		CCNA_03388	0.76	+0.5
3,561,826	-		CCNA_03388	0.78	+0.6
3,561,826	-		CCNA_03388	0.78	-1.8
3,561,979	-				+0.6
3,562,098	+		CCNA_03389	0.12	-0.3
3,562,132	+		CCNA_03389	0.15	-1.8
3,562,140	-		CCNA_03389	0.16	-0.0
3,562,155	+		CCNA_03389	0.18	-1.4
3,562,293	-		CCNA_03389	0.33	-2.2
3,562,295	+		CCNA_03389	0.33	+0.6
3,562,304	+		CCNA_03389	0.34	-2.5
3,562,312	-		CCNA_03389	0.35	+1.9
3,562,312	-		CCNA_03389	0.35	-0.7
3,562,324	-		CCNA_03389	0.36	-0.6
3,562,340	+		CCNA_03389	0.38	-1.1
3,562,363	+		CCNA_03389	0.40	+3.0
3,562,371	-		CCNA_03389	0.41	-0.2
3,562,484	+		CCNA_03389	0.53	+1.1
3,562,512	+		CCNA_03389	0.56	+0.6
3,562,539	-		CCNA_03389	0.59	-1.1
3,562,563	+		CCNA_03389	0.61	-1.4
3,562,564	-		CCNA_03389	0.62	-1.9
3,562,573	+		CCNA_03389	0.62	-0.2
3,562,578	+		CCNA_03389	0.63	-1.3
3,562,626	+		CCNA_03389	0.68	-1.3
3,562,626	+		CCNA_03389	0.68	+2.3
3,562,634	-		CCNA_03389	0.69	+0.9
3,562,634	-		CCNA_03389	0.69	-1.8
3,562,634	-		CCNA_03389	0.69	-0.3
3,562,730	+		CCNA_03389	0.79	-1.0
3,562,745	+		CCNA_03389	0.81	-1.5
3,562,745	+		CCNA_03389	0.81	-0.7
3,562,795	-		CCNA_03389	0.86	+0.5
3,562,822	+		CCNA_03389	0.89	+1.6
3,562,830	-				+0.2
3,562,830	-				-0.2
3,562,830	-				-0.2
3,562,830	-				-1.0
3,562,847	+				-1.3
3,562,847	+				+1.3
3,562,855	-				-0.9
3,562,873	+				+1.1
3,562,974	-				+1.3